Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006665.1 Hibiscus syriacus cultivar Beakdansim tig00016508_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76264

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
452--492
20
2.2
19
91
8
66
29
26
17
26
1.97
8809--8890
29
2.8
29
92
1
128
32
14
10
41
1.81
13572--13653
29
2.8
29
92
1
128
32
14
10
41
1.81
17532--17646
60
1.9
60
84
7
153
34
16
5
43
1.70
18531--18643
60
1.9
60
85
7
158
34
18
14
32
1.91
18518--18655
60
2.3
60
80
7
156
34
18
16
30
1.94
20656--20680
2
12.5
2
100
0
50
52
0
0
48
1.00
20407--20947
264
2.0
263
96
1
985
36
13
13
36
1.85
20921--20945
2
12.5
2
100
0
50
52
0
0
48
1.00
21036--21068
14
2.3
15
94
5
59
39
9
21
30
1.84
22526--22571
12
3.6
12
81
16
56
45
17
19
17
1.85
22532--22572
12
3.1
13
80
19
57
46
14
17
21
1.84
24864--24903
21
1.9
21
94
0
71
30
15
7
47
1.72
24898--24996
33
3.0
33
92
1
155
33
7
14
45
1.71
24982--25036
13
4.2
13
75
13
58
34
3
12
49
1.59
25432--25487
15
3.6
15
79
9
67
32
12
12
42
1.80
25451--25484
18
1.9
18
94
5
61
38
11
11
38
1.79
25577--25608
16
2.0
17
88
11
50
43
21
21
12
1.86
38933--39037
42
2.5
42
83
4
124
43
20
8
26
1.81
40662--40736
35
2.1
35
92
4
125
29
21
17
32
1.96
41572--41614
18
2.4
18
88
0
59
30
30
18
20
1.97
44212--44278
22
3.0
22
100
0
134
26
26
26
19
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44481--44557
30
2.5
30
91
2
118
31
23
5
40
1.76
44571--44642
29
2.5
29
90
0
108
37
13
9
38
1.78
44960--45118
67
2.4
67
87
4
214
17
28
25
28
1.98
51138--51189
23
2.3
23
90
3
79
30
26
25
17
1.97
51146--51191
23
2.0
23
95
4
85
26
28
26
19
1.99
51394--51470
30
2.5
30
91
2
118
31
23
5
40
1.76
51487--51532
14
3.2
14
78
6
56
39
15
8
36
1.78
51484--51555
29
2.5
29
90
0
108
38
12
8
40
1.73
51859--52031
67
2.6
67
85
4
215
17
27
27
28
1.98
54150--54194
2
22.5
2
100
0
90
51
0
0
48
1.00
54653--54714
22
2.7
23
82
9
74
17
24
35
22
1.95
54652--54715
23
2.9
21
81
11
67
17
25
35
21
1.95
62169--62217
21
2.3
21
85
0
62
20
14
30
34
1.92
63058--63088
12
2.6
12
100
0
62
16
22
6
54
1.64
66578--66785
114
1.8
116
86
3
305
48
4
10
36
1.58
66578--66817
114
2.0
118
83
7
301
50
3
10
36
1.54
66578--66799
113
1.9
116
84
3
290
50
4
9
36
1.55
68859--68905
2
23.5
2
100
0
94
48
0
0
51
1.00
69087--69147
33
1.9
30
83
9
77
40
13
0
45
1.43
71619--71667
26
1.9
25
88
12
73
42
4
4
48
1.40
74321--74361
20
2.0
20
100
0
82
41
39
4
14
1.67

Tables:   1

The End!