Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006666.1 Hibiscus syriacus cultivar Beakdansim tig00016509_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47693

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
975--1038
5
13.0
5
79
15
71
78
0
4
17
0.92
973--1037
34
1.9
33
87
9
96
76
0
6
16
0.97
5425--5709
40
7.8
37
74
13
225
44
6
3
45
1.44
5596--5643
2
24.5
2
95
4
89
50
0
0
50
1.00
5732--5782
2
26.0
2
92
4
86
49
0
1
49
1.12
5538--5796
134
1.9
137
82
5
328
49
5
3
42
1.43
6273--7802
80
18.8
80
85
3
1706
24
18
22
34
1.96
6266--7802
567
2.7
562
82
4
1868
24
18
22
34
1.96
8494--8755
94
2.7
94
86
4
346
32
17
16
32
1.93
11168--11459
20
14.2
20
75
8
230
39
25
18
16
1.91
11225--11450
42
5.4
42
86
8
184
37
26
19
16
1.93
11251--11451
62
3.2
61
88
4
262
37
26
18
17
1.93
11293--11459
82
2.0
82
95
2
300
39
25
19
16
1.91
11555--11598
6
7.5
6
97
2
81
31
52
15
0
1.44
12095--12161
6
11.5
6
98
1
120
0
16
52
31
1.44
12257--12714
42
11.1
40
84
11
433
16
19
26
37
1.93
12264--12713
62
7.3
59
83
12
427
16
19
26
37
1.93
12257--12714
104
4.5
103
90
5
696
16
19
26
37
1.93
14579--14640
33
1.9
32
87
9
90
46
3
8
41
1.49
14759--14793
2
18.0
2
94
5
63
51
0
0
48
1.00
14772--14949
40
4.5
40
74
18
126
47
7
3
42
1.48
14770--14867
42
2.3
42
87
5
135
46
8
3
41
1.49
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14931--14977
2
24.5
2
78
8
53
57
0
0
42
0.98
20149--20283
59
2.3
59
77
5
137
31
26
7
34
1.84
20430--20585
60
2.6
60
80
6
172
44
5
18
31
1.73
24471--24535
20
3.8
16
72
22
53
49
3
7
40
1.47
27474--27519
21
2.3
21
85
7
60
34
30
15
19
1.93
29357--29383
2
13.5
2
100
0
54
51
0
0
48
1.00
29546--29600
2
27.5
2
100
0
110
50
0
0
49
1.00
29608--29674
22
2.9
25
78
17
81
31
4
0
64
1.14
34057--34145
45
1.9
47
88
4
137
29
10
22
38
1.87
43731--43787
11
5.4
11
79
8
64
82
0
15
1
0.75
43729--43787
20
2.8
21
79
5
66
83
0
15
1
0.74
43729--43787
31
1.9
31
85
0
82
83
0
15
1
0.74
43729--43767
1
39.0
1
84
0
51
92
0
7
0
0.39
43772--43834
16
3.8
18
76
14
64
69
0
17
12
1.18
43845--43882
19
1.9
19
94
5
67
76
2
15
5
1.08
45240--45803
55
10.6
54
88
7
560
28
15
26
28
1.96
45226--45769
106
5.1
104
83
8
518
28
15
26
29
1.96
45287--45807
164
3.2
164
83
9
615
28
16
26
28
1.97
45287--45803
106
4.8
110
84
8
568
28
16
26
29
1.97

Tables:   1

The End!