Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006683.1 Hibiscus syriacus cultivar Beakdansim tig00016580_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55405

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16036--16071
16
2.1
17
90
10
56
25
8
25
41
1.83
16141--16171
15
2.1
15
100
0
62
25
19
19
35
1.95
22049--22086
19
2.0
19
100
0
76
31
10
10
47
1.72
27004--27039
18
2.0
18
88
0
54
16
33
0
50
1.46
28771--28803
15
2.2
15
94
0
57
9
69
15
6
1.34
29959--29983
2
12.5
2
100
0
50
52
0
0
48
1.00
33047--33092
3
15.3
3
95
0
56
58
0
0
41
0.98
35594--35781
100
1.9
100
87
4
281
42
18
21
17
1.89
38710--38751
14
2.7
15
79
13
50
57
14
0
28
1.38
41845--41871
2
13.5
2
100
0
54
51
0
0
48
1.00
48345--48395
22
2.2
24
82
10
61
43
1
1
52
1.23
48353--48453
51
1.9
53
88
7
154
47
2
2
46
1.33
48369--48484
51
2.3
50
78
11
128
49
2
2
45
1.29
51439--51474
17
2.1
18
89
5
56
50
0
0
50
1.00
54235--54340
41
2.5
42
92
6
180
23
6
20
49
1.73
55374--55405
7
4.4
7
92
7
55
68
0
0
31
0.90
55377--55405
15
1.9
15
100
0
58
68
0
0
31
0.89

Tables:   1

The End!