Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006686.1 Hibiscus syriacus cultivar Beakdansim tig00016606_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47318

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6032--6066
3
11.7
3
93
0
61
65
0
2
31
1.07
7055--7447
191
2.0
194
96
2
731
36
12
15
35
1.85
7490--7559
2
35.0
2
100
0
140
50
0
0
50
1.00
17526--17609
43
2.0
43
85
0
114
19
3
19
58
1.54
18496--18569
31
2.4
31
81
4
96
48
9
14
27
1.75
18613--18664
13
3.4
17
65
25
51
53
9
9
26
1.64
18615--18665
16
3.4
16
70
25
56
52
9
11
25
1.68
18585--18668
29
2.9
29
89
7
118
52
11
10
25
1.70
24463--24493
5
6.2
5
92
0
53
22
54
19
3
1.58
28640--28698
30
2.0
30
86
0
82
42
15
5
37
1.69
31929--31966
20
1.9
20
94
0
67
42
13
18
26
1.87
31929--31972
20
2.4
18
85
11
54
43
11
18
27
1.84
33389--33424
18
2.1
17
89
5
54
38
0
0
61
0.96
35416--35502
16
5.4
16
65
26
58
41
2
1
55
1.20
35421--35524
36
3.0
35
73
21
112
40
2
2
53
1.30
35451--35499
15
3.3
15
80
13
66
46
0
0
53
1.00
35421--35515
29
3.0
30
76
19
86
40
3
3
53
1.33
35404--35524
65
1.9
62
85
11
163
41
2
2
53
1.27
37794--37830
15
2.5
15
90
0
56
24
0
2
72
0.97
40297--40354
29
2.0
29
89
0
89
39
17
8
34
1.80

Tables:   1

The End!