Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006692.1 Hibiscus syriacus cultivar Beakdansim tig00016648_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75327

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12353--12438
28
3.1
26
84
14
102
24
10
11
53
1.68
12353--12438
29
3.1
28
85
11
99
24
10
11
53
1.68
12454--12527
31
2.4
31
81
4
96
27
14
9
48
1.75
23154--23215
23
2.7
23
78
16
67
72
1
9
16
1.18
23290--23355
21
3.2
21
73
2
62
71
1
1
25
1.04
23537--23573
19
2.0
19
85
15
51
67
0
2
29
1.04
23568--23660
46
2.0
45
82
10
109
61
5
2
31
1.30
23522--23643
64
1.9
63
88
5
181
62
2
2
32
1.22
23994--24095
37
2.8
37
84
0
123
30
13
13
42
1.83
25537--25571
3
11.7
3
93
0
61
31
2
0
65
1.07
26953--26994
19
2.2
19
86
0
57
30
33
9
26
1.88
42968--43429
225
2.0
226
94
1
818
23
30
14
31
1.94
45937--45983
20
2.3
20
96
0
85
42
14
0
42
1.46
47446--47485
2
20.0
2
100
0
80
50
0
0
50
1.00
54148--54179
3
10.7
3
100
0
64
68
0
0
31
0.90
65133--65160
3
9.3
3
100
0
56
64
0
0
35
0.94
66610--66651
17
2.4
17
80
15
50
40
4
0
54
1.21
71575--71600
13
2.0
13
100
0
52
30
23
7
38
1.83

Tables:   1

The End!