Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006693.1 Hibiscus syriacus cultivar Beakdansim tig00016651_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54871

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3113--3176
13
4.8
13
74
16
60
54
3
10
31
1.51
3124--3179
6
8.8
6
75
14
51
53
1
14
30
1.51
3150--3179
11
2.6
11
94
5
51
53
0
16
30
1.44
3122--3198
39
2.0
37
82
9
93
54
2
11
31
1.50
4013--4065
21
2.7
20
82
5
54
32
3
0
64
1.12
4786--4846
21
3.0
21
75
13
65
72
1
9
16
1.19
6803--6832
11
2.7
11
100
0
60
73
0
0
26
0.84
8246--8274
3
10.0
3
92
7
51
65
0
0
34
0.93
8664--9344
220
3.2
217
82
10
848
32
20
16
30
1.95
8920--9312
201
2.0
200
93
0
678
33
20
15
31
1.93
9382--9424
22
2.0
22
95
0
77
18
25
16
39
1.91
13980--14136
54
2.9
54
91
0
242
24
24
15
35
1.94
15009--15188
75
2.4
75
84
1
254
30
22
15
31
1.95
22060--22145
28
3.0
27
72
14
66
55
4
8
31
1.49
24357--24408
26
2.0
26
100
0
104
42
3
3
50
1.39
25064--25188
43
2.8
44
88
7
182
21
23
16
39
1.92
29306--29420
32
3.2
32
66
25
86
24
1
13
60
1.42
29269--29456
76
2.5
76
95
1
333
27
1
13
58
1.42
30072--30100
11
2.7
11
94
5
51
20
0
0
79
0.74
38909--38975
30
2.2
30
86
0
89
35
23
25
14
1.94
40891--40934
17
2.7
16
86
6
61
25
11
2
61
1.41
44247--44398
27
5.5
27
82
6
171
41
17
4
36
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44217--44400
56
3.3
56
84
5
214
42
16
3
36
1.67
44217--44400
28
6.6
27
77
12
149
42
16
3
36
1.67
51549--51679
27
4.7
27
76
12
108
44
16
3
35
1.64
51545--51678
55
2.4
55
83
6
182
44
16
2
35
1.63
51701--51745
17
2.6
18
85
3
65
22
33
31
13
1.92

Tables:   1

The End!