Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006694.1 Hibiscus syriacus cultivar Beakdansim tig00016653_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36498

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1748--1863
53
2.2
53
92
3
191
50
12
6
29
1.66
4667--4753
44
2.0
44
88
4
133
43
8
2
45
1.46
5383--5561
2
96.0
2
73
21
149
53
3
0
43
1.21
13536--13592
24
2.4
24
78
0
69
24
19
19
36
1.94
17522--17603
23
3.6
23
94
0
137
26
23
21
28
1.99
19407--19439
16
2.1
16
94
5
59
30
30
6
33
1.82
20425--20466
19
2.2
20
86
4
59
69
0
7
23
1.13
21558--21791
7
33.4
7
76
17
195
55
3
0
41
1.18
21558--21810
2
133.5
2
73
21
199
54
4
0
41
1.20
21558--21810
5
44.5
6
75
19
199
54
4
0
41
1.20
21575--21808
59
3.9
60
77
20
211
53
4
0
41
1.20
26509--26548
21
1.9
21
94
0
71
30
15
7
47
1.72
26543--26686
33
4.6
32
78
14
165
31
6
16
45
1.72
26868--26921
21
2.6
21
90
0
90
20
27
22
29
1.98
27107--27142
19
1.9
19
94
5
65
36
11
11
41
1.76
33112--33146
17
2.1
17
100
0
70
34
22
0
42
1.54
35648--35706
30
1.9
30
86
13
84
52
1
5
40
1.33

Tables:   1

The End!