Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: VEPZ01006703.1 Hibiscus syriacus cultivar Beakdansim tig00016693_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 66283
ACGTcount: A:0.33, C:0.18, G:0.16, T:0.33
Found at i:1141 original size:14 final size:14
Alignment explanation
Indices: 1122--1151 Score: 60
Period size: 14 Copynumber: 2.1 Consensus size: 14
1112 ATGGAATTGG
1122 GTTTTGTTGTTGTT
1 GTTTTGTTGTTGTT
1136 GTTTTGTTGTTGTT
1 GTTTTGTTGTTGTT
1150 GT
1 GT
1152 ACTGAATTAT
Statistics
Matches: 16, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
14 16 1.00
ACGTcount: A:0.00, C:0.00, G:0.30, T:0.70
Consensus pattern (14 bp):
GTTTTGTTGTTGTT
Found at i:6040 original size:9 final size:8
Alignment explanation
Indices: 6028--6101 Score: 50
Period size: 7 Copynumber: 9.2 Consensus size: 8
6018 AATATTTTAT
6028 ATATAATTA
1 ATATAA-TA
6037 ATATAA-A
1 ATATAATA
6044 TATATAA-A
1 -ATATAATA
*
6052 ATATTATA
1 ATATAATA
6060 TATATAATTA
1 -ATATAA-TA
6070 ATATAA-A
1 ATATAATA
6077 ATATAA-A
1 ATATAATA
*
6084 ATATTAT-
1 ATATAATA
6091 ATATATATA
1 ATATA-ATA
6100 AT
1 AT
6102 CGGGGCAGGT
Statistics
Matches: 54, Mismatches: 4, Indels: 14
0.75 0.06 0.19
Matches are distributed among these distances:
7 23 0.43
8 10 0.19
9 19 0.35
10 2 0.04
ACGTcount: A:0.58, C:0.00, G:0.00, T:0.42
Consensus pattern (8 bp):
ATATAATA
Found at i:6086 original size:32 final size:33
Alignment explanation
Indices: 6016--6097 Score: 148
Period size: 33 Copynumber: 2.5 Consensus size: 33
6006 CCCGAACCCA
*
6016 AAAATATTTTATATATAATTAATATAAATATAT
1 AAAATATTATATATATAATTAATATAAATATAT
6049 AAAATATTATATATATAATTAATATAAA-ATAT
1 AAAATATTATATATATAATTAATATAAATATAT
6081 AAAATATTATATATATA
1 AAAATATTATATATATA
6098 TAATCGGGGC
Statistics
Matches: 48, Mismatches: 1, Indels: 1
0.96 0.02 0.02
Matches are distributed among these distances:
32 21 0.44
33 27 0.56
ACGTcount: A:0.57, C:0.00, G:0.00, T:0.43
Consensus pattern (33 bp):
AAAATATTATATATATAATTAATATAAATATAT
Found at i:8493 original size:2 final size:2
Alignment explanation
Indices: 8486--8553 Score: 113
Period size: 2 Copynumber: 35.0 Consensus size: 2
8476 AAGCTAAATA
8486 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
*
8528 AT AT AT AT A- AT AT AT A- AT AT AA AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT
8554 TTAATAATTT
Statistics
Matches: 62, Mismatches: 2, Indels: 4
0.91 0.03 0.06
Matches are distributed among these distances:
1 2 0.03
2 60 0.97
ACGTcount: A:0.53, C:0.00, G:0.00, T:0.47
Consensus pattern (2 bp):
AT
Found at i:13247 original size:9 final size:9
Alignment explanation
Indices: 13233--13262 Score: 60
Period size: 9 Copynumber: 3.3 Consensus size: 9
13223 GATCTCTCTC
13233 TCATCGTTG
1 TCATCGTTG
13242 TCATCGTTG
1 TCATCGTTG
13251 TCATCGTTG
1 TCATCGTTG
13260 TCA
1 TCA
13263 ACGCTTCTGC
Statistics
Matches: 21, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
9 21 1.00
ACGTcount: A:0.13, C:0.23, G:0.20, T:0.43
Consensus pattern (9 bp):
TCATCGTTG
Found at i:14797 original size:43 final size:42
Alignment explanation
Indices: 14618--14797 Score: 134
Period size: 43 Copynumber: 4.3 Consensus size: 42
14608 GCTAAAGTTC
** * *
14618 GCGGCGTTTTTCAGAAAAACC-GCAATA-GTGTTGATATTTA
1 GCGGCGTTTTTCTCACAAACCTGCAGTAGGTGTTGATATTTA
* ** * * *
14658 GCGGTGTTTTTCAGACAAACGTCGCAATAGGT-TATGATGTTTA
1 GCGGCGTTTTTCTCACAAACCT-GCAGTAGGTGT-TGATATTTA
* * *
14701 GCGACGTTTTTCTCTA-AAACTCCGCAGTAGGTGTTGATATTTT
1 GCGGCGTTTTTCTC-ACAAAC-CTGCAGTAGGTGTTGATATTTA
* * *
14744 GCGGCATTTTTCTCACAAACACTGCAGTAGGTGTTGATGTTTT
1 GCGGCGTTTTTCTCACAAAC-CTGCAGTAGGTGTTGATATTTA
*
14787 GCGGTGTTTTT
1 GCGGCGTTTTT
14798 GCTAAAAACG
Statistics
Matches: 112, Mismatches: 20, Indels: 13
0.77 0.14 0.09
Matches are distributed among these distances:
40 18 0.16
42 8 0.07
43 84 0.75
44 2 0.02
ACGTcount: A:0.23, C:0.16, G:0.24, T:0.37
Consensus pattern (42 bp):
GCGGCGTTTTTCTCACAAACCTGCAGTAGGTGTTGATATTTA
Found at i:15234 original size:21 final size:21
Alignment explanation
Indices: 15208--15260 Score: 61
Period size: 21 Copynumber: 2.5 Consensus size: 21
15198 CTGCTGATAT
*
15208 GCTGCTTCTCTCTGTGCTGCC
1 GCTGCTTCTCTCTCTGCTGCC
* * *
15229 GTTGCTTCTTTCTCTGCTTCC
1 GCTGCTTCTCTCTCTGCTGCC
*
15250 GCTGCTGCTCT
1 GCTGCTTCTCT
15261 AGCTGCTTCT
Statistics
Matches: 25, Mismatches: 7, Indels: 0
0.78 0.22 0.00
Matches are distributed among these distances:
21 25 1.00
ACGTcount: A:0.00, C:0.36, G:0.21, T:0.43
Consensus pattern (21 bp):
GCTGCTTCTCTCTCTGCTGCC
Found at i:22443 original size:41 final size:42
Alignment explanation
Indices: 22396--22490 Score: 104
Period size: 42 Copynumber: 2.3 Consensus size: 42
22386 TTTTTTAGAA
22396 AAATGCCACT-ATAAACCACCCTATTACGGCGTTT-TAGGTAT
1 AAATGCCACTAATAAACCACCCTATTACGGCGTTTGT-GGTAT
* ** * *
22437 AAATGCCGCTAATTTACCACTCTATTGCGGCGTTTGTGGTAT
1 AAATGCCACTAATAAACCACCCTATTACGGCGTTTGTGGTAT
* *
22479 AAACGCCGCTAA
1 AAATGCCACTAA
22491 ATTACCACTC
Statistics
Matches: 46, Mismatches: 6, Indels: 3
0.84 0.11 0.05
Matches are distributed among these distances:
41 9 0.20
42 36 0.78
43 1 0.02
ACGTcount: A:0.28, C:0.24, G:0.18, T:0.29
Consensus pattern (42 bp):
AAATGCCACTAATAAACCACCCTATTACGGCGTTTGTGGTAT
Found at i:22462 original size:42 final size:42
Alignment explanation
Indices: 22410--22572 Score: 183
Period size: 42 Copynumber: 3.9 Consensus size: 42
22400 GCCACTATAA
* * * *
22410 ACCACCCTATTACGGCGTTTTAGGTATAAATGCCGCTAATTT
1 ACCACTCTATTGCGGCGTTTTAGGTATAAACGCCGCTAAATT
22452 ACCACTCTATTGCGGCGTTTGT-GGTATAAACGCCGCTAAATT
1 ACCACTCTATTGCGGCGTTT-TAGGTATAAACGCCGCTAAATT
*
22494 ACCACTCTATTGCGGC-ATTTAGGCTA-AAACGCCGCTAAATGT
1 ACCACTCTATTGCGGCGTTTTAGG-TATAAACGCCGCTAAAT-T
* * *
22536 -CTACTCTATTGCGGCATTTGTA-CTATAAACGCCGCTA
1 ACCACTCTATTGCGGCGTTT-TAGGTATAAACGCCGCTA
22573 TTGATTAACC
Statistics
Matches: 106, Mismatches: 8, Indels: 14
0.83 0.06 0.11
Matches are distributed among these distances:
40 1 0.01
41 34 0.32
42 68 0.64
43 3 0.03
ACGTcount: A:0.26, C:0.25, G:0.18, T:0.31
Consensus pattern (42 bp):
ACCACTCTATTGCGGCGTTTTAGGTATAAACGCCGCTAAATT
Found at i:22516 original size:83 final size:84
Alignment explanation
Indices: 22410--22572 Score: 206
Period size: 83 Copynumber: 2.0 Consensus size: 84
22400 GCCACTATAA
* * * *
22410 ACCACCCTATTACGGCGTTTTAGG-TATAAATGCCGCT-AATTTACCACTCTATTGCGGCGTTTG
1 ACCACCCTATTACGGCGATTTAGGCTA-AAACGCCGCTAAATGT-CCACTCTATTGCGGCATTTG
**
22473 TGGTATAAACGCCGCTAAATT
64 TACTATAAACGCCGCTAAATT
* * *
22494 ACCACTCTATTGCGGC-ATTTAGGCTAAAACGCCGCTAAATGTCTACTCTATTGCGGCATTTGTA
1 ACCACCCTATTACGGCGATTTAGGCTAAAACGCCGCTAAATGTCCACTCTATTGCGGCATTTGTA
22558 CTATAAACGCCGCTA
66 CTATAAACGCCGCTA
22573 TTGATTAACC
Statistics
Matches: 68, Mismatches: 9, Indels: 5
0.83 0.11 0.06
Matches are distributed among these distances:
83 48 0.71
84 20 0.29
ACGTcount: A:0.26, C:0.25, G:0.18, T:0.31
Consensus pattern (84 bp):
ACCACCCTATTACGGCGATTTAGGCTAAAACGCCGCTAAATGTCCACTCTATTGCGGCATTTGTA
CTATAAACGCCGCTAAATT
Found at i:22542 original size:41 final size:42
Alignment explanation
Indices: 22434--22778 Score: 198
Period size: 41 Copynumber: 8.3 Consensus size: 42
22424 GCGTTTTAGG
* * * *
22434 TATAAATGCCGCTAATTTACCACTCTATTGCGGCGTTTGTGG
1 TATAAACGCCGCTAAATTACCACTCTATTGCGGCATTTGTGC
22476 TATAAACGCCGCTAAATTACCACTCTATTGCGGCATTTAG-GC
1 TATAAACGCCGCTAAATTACCACTCTATTGCGGCATTT-GTGC
* *
22518 TA-AAACGCCGCTAAATGT-CTACTCTATTGCGGCATTTGTAC
1 TATAAACGCCGCTAAAT-TACCACTCTATTGCGGCATTTGTGC
* * * *
22559 TATAAACGCCGCTATTGATTAACC-CT-T-TTGTGGCGTTTAT-C
1 TATAAACGCCGCTA--AATT-ACCACTCTATTGCGGCATTTGTGC
* * * ** *
22600 TAAAAACGACGC-AAACGTA-TTCT-TCATTGTGGCATTTGTTG-
1 TATAAACGCCGCTAAA-TTACCACTCT-ATTGCGGCATTTG-TGC
* * * * * *
22641 GAAAAACGCCACTATAA--ACCACCCTATTACGGCATTT-TAGG
1 TATAAACGCCGCTA-AATTACCACTCTATTGCGGCATTTGT-GC
* * * ** *
22682 TATAAACGTCGCTAAATTACCACTCTATTACAGTGTTTGGGC
1 TATAAACGCCGCTAAATTACCACTCTATTGCGGCATTTGTGC
** * * *
22724 TA-AAACGCCGCTAAATGGCTACTCTATTGCGGCATTTTTAC
1 TATAAACGCCGCTAAATTACCACTCTATTGCGGCATTTGTGC
22765 TATAAACGCCGCTA
1 TATAAACGCCGCTA
22779 TTGATTAACC
Statistics
Matches: 232, Mismatches: 47, Indels: 48
0.71 0.14 0.15
Matches are distributed among these distances:
38 5 0.02
39 2 0.01
40 16 0.07
41 107 0.46
42 92 0.40
43 5 0.02
44 4 0.02
45 1 0.00
ACGTcount: A:0.28, C:0.23, G:0.17, T:0.32
Consensus pattern (42 bp):
TATAAACGCCGCTAAATTACCACTCTATTGCGGCATTTGTGC
Found at i:22802 original size:248 final size:246
Alignment explanation
Indices: 22344--22813 Score: 628
Period size: 248 Copynumber: 1.9 Consensus size: 246
22334 TACTATTATA
* * *
22344 GCGTTTGTCAAAAACGACGCTAAAGTATTCTTCATTGCGGCATTTTTTAGAAAAATGCCACTATA
1 GCGTTTATCAAAAACGACGCTAAAGTATTCTTCATTGCGGCATTTGTTAGAAAAACGCCACTATA
* * * * *
22409 AACCACCCTATTACGGCGTTTTAGGTATAAATGCCGCTAATTTACCACTCTATTGCGGCGTTTGT
66 AACCACCCTATTACGGCATTTTAGGTATAAACGCCGCTAAATTACCACTCTATTACAGCGTTTGT
* *
22474 GGTATAAACGCCGCTAAATTACCACTCTATTGCGGCATTTAGGCTAAAACGCCGCTAAATGTCTA
131 GGTATAAACGCCGCTAAATGACCACTCTATTGCGGCATTTAGACTAAAACGCCGCTAAATGTCTA
* *
22539 CTCTATTGCGGCATTTGTACTATAAACGCCGCTATTGATTAACCCTTTTGTG
196 CCCTATTGCGGCATTTGT-CTAAAAACGCCGCTATTGATTAACCCTTTTGTG
* *
22591 GCGTTTATCTAAAAACGACGC-AAACGTATTCTTCATTGTGGCATTTGTTGGAAAAACGCCACTA
1 GCGTTTATC-AAAAACGACGCTAAA-GTATTCTTCATTGCGGCATTTGTTAGAAAAACGCCACTA
* *
22655 TAAACCACCCTATTACGGCATTTTAGGTATAAACGTCGCTAAATTACCACTCTATTACAGTGTTT
64 TAAACCACCCTATTACGGCATTTTAGGTATAAACGCCGCTAAATTACCACTCTATTACAGCGTTT
* * ** *
22720 G-GGCTA-AAACGCCGCTAAATGGCTACTCTATTGCGGCATTTTTACTATAAACGCCGCT-ATTG
129 GTGG-TATAAACGCCGCTAAATGACCACTCTATTGCGGCATTTAGACTA-AAACGCCGCTAAATG
*
22782 AT-TAACCCT-TCTGTGGCATTTGTCTAAAAACG
192 -TCT-ACCCTAT-TGCGGCATTTGTCTAAAAACG
22814 AAGCAAAAGT
Statistics
Matches: 194, Mismatches: 22, Indels: 14
0.84 0.10 0.06
Matches are distributed among these distances:
247 61 0.31
248 133 0.69
ACGTcount: A:0.28, C:0.23, G:0.17, T:0.32
Consensus pattern (246 bp):
GCGTTTATCAAAAACGACGCTAAAGTATTCTTCATTGCGGCATTTGTTAGAAAAACGCCACTATA
AACCACCCTATTACGGCATTTTAGGTATAAACGCCGCTAAATTACCACTCTATTACAGCGTTTGT
GGTATAAACGCCGCTAAATGACCACTCTATTGCGGCATTTAGACTAAAACGCCGCTAAATGTCTA
CCCTATTGCGGCATTTGTCTAAAAACGCCGCTATTGATTAACCCTTTTGTG
Found at i:22831 original size:206 final size:206
Alignment explanation
Indices: 22452--22921 Score: 654
Period size: 206 Copynumber: 2.3 Consensus size: 206
22442 CCGCTAATTT
* * * * *
22452 ACCACTCTATTGCGGCGTTTGTGGTATAAACGCCGCTAAATTACCACTCTATTGCGGCATTTAGG
1 ACCACCCTATTACGGCATTTGTGGTATAAACGCCGCTAAATTACCACTCTATTACAGCATTTAGG
*
22517 CTAAAACGCCGCTAAATGTCTACTCTATTGCGGCATTTGTACTATAAACGCCGCTATTGATTAAC
66 CTAAAACGCCGCTAAATGGCTACTCTATTGCGGCATTTGTACTATAAACGCCGCTATTGATTAAC
* * * * *
22582 CCTTTTGTGGCGTTTATCTAAAAACGACGCAAACGTATTCTTCATTGTGGCATTTGTTGGAAAAA
131 CCTTCTGTGGCATTTATCTAAAAACGAAGCAAAAGTATTCTTCATTGCGGCATTTGTTGGAAAAA
22647 CGCCACTATAA
196 CGCCACTATAA
* ** *
22658 ACCACCCTATTACGGCATTT-TAGGTATAAACGTCGCTAAATTACCACTCTATTACAGTGTTTGG
1 ACCACCCTATTACGGCATTTGT-GGTATAAACGCCGCTAAATTACCACTCTATTACAGCATTTAG
*
22722 GCTAAAACGCCGCTAAATGGCTACTCTATTGCGGCATTTTTACTATAAACGCCGCTATTGATTAA
65 GCTAAAACGCCGCTAAATGGCTACTCTATTGCGGCATTTGTACTATAAACGCCGCTATTGATTAA
* * *
22787 CCCTTCTGTGGCATTTGTCTAAAAACGAAGCAAAAGTGTTCTTCATTGCGGCGTTTGTTGGAAAA
130 CCCTTCTGTGGCATTTATCTAAAAACGAAGCAAAAGTATTCTTCATTGCGGCATTTGTTGGAAAA
22852 ACGCCACTATAA
195 ACGCCACTATAA
* *** * * * * * * *
22864 ACCACTCTAGCGCGGCATTTTTGGTAAAAATGCCGCTATATTTCTACTCTATTGCAGC
1 ACCACCCTATTACGGCATTTGTGGTATAAACGCCGCTAAATTACCACTCTATTACAGC
22922 GTTTGTATGA
Statistics
Matches: 231, Mismatches: 31, Indels: 4
0.87 0.12 0.02
Matches are distributed among these distances:
205 1 0.00
206 229 0.99
207 1 0.00
ACGTcount: A:0.27, C:0.23, G:0.18, T:0.31
Consensus pattern (206 bp):
ACCACCCTATTACGGCATTTGTGGTATAAACGCCGCTAAATTACCACTCTATTACAGCATTTAGG
CTAAAACGCCGCTAAATGGCTACTCTATTGCGGCATTTGTACTATAAACGCCGCTATTGATTAAC
CCTTCTGTGGCATTTATCTAAAAACGAAGCAAAAGTATTCTTCATTGCGGCATTTGTTGGAAAAA
CGCCACTATAA
Found at i:24190 original size:2 final size:2
Alignment explanation
Indices: 24183--24207 Score: 50
Period size: 2 Copynumber: 12.5 Consensus size: 2
24173 GTCCCTATTA
24183 AT AT AT AT AT AT AT AT AT AT AT AT A
1 AT AT AT AT AT AT AT AT AT AT AT AT A
24208 CATACATACT
Statistics
Matches: 23, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 23 1.00
ACGTcount: A:0.52, C:0.00, G:0.00, T:0.48
Consensus pattern (2 bp):
AT
Found at i:39769 original size:18 final size:18
Alignment explanation
Indices: 39746--39781 Score: 54
Period size: 18 Copynumber: 2.0 Consensus size: 18
39736 TTCGAAGGTT
*
39746 GTTTGCGAATTTTACTCC
1 GTTTGCCAATTTTACTCC
*
39764 GTTTGCCATTTTTACTCC
1 GTTTGCCAATTTTACTCC
39782 AACAACTGAT
Statistics
Matches: 16, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
18 16 1.00
ACGTcount: A:0.14, C:0.25, G:0.14, T:0.47
Consensus pattern (18 bp):
GTTTGCCAATTTTACTCC
Found at i:49698 original size:32 final size:32
Alignment explanation
Indices: 49583--49703 Score: 113
Period size: 31 Copynumber: 3.8 Consensus size: 32
49573 TCGACAACTG
* * *
49583 TCCATAGGTCCCGAAGAACCTAGGTAA-ACTA
1 TCCATATGTTCCGAAGAACATAGGTAATACTA
* ** *
49614 TCCATATGCTCCTTAGAACATAGGT-ATACTG
1 TCCATATGTTCCGAAGAACATAGGTAATACTA
** *
49645 TCCATATGTCTCAAAAG-ACATAGGTAATTCTA
1 TCCATATGT-TCCGAAGAACATAGGTAATACTA
*
49677 TCCATATGTTCCGTAGAACATAGGTAA
1 TCCATATGTTCCGAAGAACATAGGTAA
49704 ACCCTCGACT
Statistics
Matches: 70, Mismatches: 16, Indels: 7
0.75 0.17 0.08
Matches are distributed among these distances:
30 1 0.01
31 42 0.60
32 27 0.39
ACGTcount: A:0.34, C:0.21, G:0.17, T:0.28
Consensus pattern (32 bp):
TCCATATGTTCCGAAGAACATAGGTAATACTA
Found at i:53265 original size:21 final size:22
Alignment explanation
Indices: 53238--53300 Score: 76
Period size: 22 Copynumber: 2.9 Consensus size: 22
53228 AACAGAACCC
*
53238 GAGGGGGTATCGATTCCC-C-T
1 GAGGGGGGATCGATTCCCTCAT
* *
53258 GTGGGGGGAATCGGTTCCCTCAT
1 GAGGGGGG-ATCGATTCCCTCAT
53281 GAGGGGGGATCGATTCCCTC
1 GAGGGGGGATCGATTCCCTC
53301 TGCACCAAAA
Statistics
Matches: 35, Mismatches: 5, Indels: 4
0.80 0.11 0.09
Matches are distributed among these distances:
20 6 0.17
21 9 0.26
22 12 0.34
23 8 0.23
ACGTcount: A:0.14, C:0.24, G:0.38, T:0.24
Consensus pattern (22 bp):
GAGGGGGGATCGATTCCCTCAT
Found at i:59735 original size:3 final size:3
Alignment explanation
Indices: 59727--59778 Score: 90
Period size: 3 Copynumber: 18.0 Consensus size: 3
59717 TTTTTTCATC
59727 TTA TTA TTA TTA TTA TTA TTA TTA TT- TTA -TA TTA TTA TTA TTA TTA
1 TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA
59773 TTA TTA
1 TTA TTA
59779 AATAAAAAAA
Statistics
Matches: 47, Mismatches: 0, Indels: 4
0.92 0.00 0.08
Matches are distributed among these distances:
2 4 0.09
3 43 0.91
ACGTcount: A:0.33, C:0.00, G:0.00, T:0.67
Consensus pattern (3 bp):
TTA
Found at i:63620 original size:13 final size:12
Alignment explanation
Indices: 63588--63612 Score: 50
Period size: 12 Copynumber: 2.1 Consensus size: 12
63578 CATTGGCAAG
63588 TCCAATTTAACT
1 TCCAATTTAACT
63600 TCCAATTTAACT
1 TCCAATTTAACT
63612 T
1 T
63613 ATCAATTTTA
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 13 1.00
ACGTcount: A:0.32, C:0.24, G:0.00, T:0.44
Consensus pattern (12 bp):
TCCAATTTAACT
Done.