Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000672.1 Hibiscus syriacus cultivar Beakdansim tig00001306_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  103416

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10311--10343
17
1.9
17
88
11
50
36
6
3
54
1.41
18972--19138
86
1.9
86
87
3
244
29
9
15
44
1.78
27558--27587
2
15.0
2
92
0
51
0
53
0
46
1.00
35876--35911
18
2.0
18
94
0
63
41
0
13
44
1.44
44560--44588
13
2.1
14
93
6
51
24
20
0
55
1.44
45253--45392
70
2.0
70
100
0
280
31
12
31
24
1.93
50225--50304
34
2.4
34
100
0
160
25
16
11
47
1.79
50225--50319
34
2.7
34
91
3
127
27
14
14
43
1.85
54184--54213
8
3.8
8
95
0
51
0
6
50
43
1.28
61153--61227
38
2.0
40
84
12
104
69
14
8
8
1.36
64733--64777
24
1.9
23
82
13
56
28
6
6
57
1.50
66260--66304
23
2.0
22
83
12
56
53
13
13
20
1.72
71305--71413
45
2.5
44
82
7
123
41
5
4
48
1.47
71354--71450
47
2.1
45
81
7
106
46
7
4
42
1.50
71870--71935
27
2.5
26
82
7
78
31
0
4
63
1.14
72217--72260
22
2.1
22
84
16
58
43
9
0
47
1.35
74386--74420
16
2.1
17
94
5
63
31
0
25
42
1.55
75534--75565
17
1.9
17
93
6
57
37
3
21
37
1.70
75528--75589
22
3.1
22
76
23
82
32
6
20
40
1.78
82979--83070
30
3.1
29
76
7
85
36
6
8
47
1.60
86273--86297
2
12.5
2
100
0
50
48
0
0
52
1.00
95676--96244
285
2.0
285
96
1
1043
31
16
19
32
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96917--96950
16
2.1
17
94
5
61
38
0
0
61
0.96
98678--98746
31
2.3
31
87
7
97
23
14
10
52
1.72
99656--99720
31
2.1
31
88
5
96
41
12
20
26
1.87

Tables:   1

The End!