Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006730.1 Hibiscus syriacus cultivar Beakdansim tig00016860_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46646

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8292--8329
18
2.1
18
85
9
51
39
10
50
0
1.37
8842--8881
15
2.8
15
92
7
66
30
12
22
35
1.91
15786--15818
10
3.2
11
87
12
52
39
0
0
60
0.97
15785--15818
11
3.2
11
87
4
52
38
0
0
61
0.96
16086--16154
31
2.2
31
86
2
93
50
8
5
34
1.57
32082--32154
3
24.0
3
85
2
92
60
1
0
38
1.06
32280--33222
76
12.5
76
96
0
1635
35
21
20
22
1.96
33632--34430
112
7.0
113
87
5
1060
27
18
15
39
1.91
37436--37674
93
2.6
93
99
0
469
36
22
12
28
1.90
37506--37650
45
3.2
45
61
16
107
35
20
12
31
1.90
39600--39631
16
1.9
17
93
6
57
0
18
0
81
0.70
42174--42214
21
2.0
21
95
0
73
60
12
9
17
1.57
46510--46572
3
20.0
3
82
6
63
58
1
0
39
1.07

Tables:   1

The End!