Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006738.1 Hibiscus syriacus cultivar Beakdansim tig00016910_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41537

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2770--2824
20
2.8
20
97
0
101
20
16
25
38
1.92
2750--2856
40
2.7
41
75
15
118
22
15
23
38
1.93
2830--2917
20
4.3
20
72
2
86
25
15
23
35
1.95
2905--2958
20
2.7
21
82
8
76
24
12
33
29
1.92
3730--3810
41
2.0
41
85
0
108
34
23
12
29
1.91
9153--9191
19
2.1
19
90
0
60
46
2
0
51
1.14
9336--9415
23
3.6
22
70
26
62
55
1
1
42
1.16
9307--9371
19
3.4
19
71
10
53
46
0
1
52
1.10
9713--9753
14
2.9
14
88
0
55
36
19
12
31
1.89
9764--9815
14
3.6
14
79
5
59
36
17
7
38
1.78
9762--9809
15
3.3
15
75
16
55
33
16
6
43
1.73
10078--10121
22
2.0
22
86
0
61
45
15
18
20
1.85
11019--11065
24
2.0
24
91
0
76
27
19
27
25
1.99
11194--11237
23
1.9
23
90
0
70
29
27
27
15
1.96
12858--12925
29
2.3
30
85
10
95
35
23
8
32
1.86
13703--13774
29
2.4
30
73
15
69
31
20
8
38
1.83
14021--14150
2
73.5
2
70
25
71
42
1
0
56
1.09
14031--14181
34
4.3
34
89
8
232
41
1
0
56
1.07
14027--14180
72
2.2
71
95
2
274
41
1
0
57
1.07
15220--15264
18
2.5
18
88
0
63
42
0
2
55
1.12
23183--23212
14
2.1
14
93
0
51
10
13
23
53
1.69
23182--23229
24
2.0
24
83
0
60
16
12
16
54
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24249--24323
10
7.7
10
69
21
52
10
10
20
58
1.60
24251--24301
26
2.0
26
88
7
77
11
9
17
60
1.57
24255--24319
16
4.1
16
89
0
103
9
10
21
58
1.59
24388--24420
16
2.1
16
100
0
66
6
12
24
57
1.57
25598--25642
22
2.0
23
86
4
65
37
0
4
57
1.19
31088--31146
31
1.9
31
92
0
100
42
5
8
44
1.57
31170--31290
22
5.5
22
84
3
172
48
11
1
38
1.49

Tables:   1

The End!