Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006740.1 Hibiscus syriacus cultivar Beakdansim tig00016917_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57437

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
349--564
101
2.1
103
93
1
373
24
13
24
37
1.91
9109--9153
17
2.6
17
96
0
81
17
26
26
28
1.98
11464--11523
31
1.9
31
89
0
93
25
21
15
38
1.92
13289--13364
31
2.5
31
89
2
109
25
26
14
34
1.94
16885--16932
23
2.1
23
92
0
78
54
2
0
43
1.12
16915--16960
20
2.2
20
84
7
56
56
2
2
39
1.24
16942--16993
23
2.3
23
100
0
104
50
0
7
42
1.31
17147--17305
17
9.4
17
94
0
264
37
19
11
32
1.87
30974--31234
145
1.8
145
86
1
380
44
19
9
26
1.82
32225--32273
6
8.5
6
86
8
66
48
2
0
48
1.12
32593--32620
3
9.3
3
100
0
56
0
32
0
67
0.91
33023--33054
16
2.0
16
93
0
55
0
53
12
34
1.39
34801--34868
33
2.1
33
83
5
84
35
0
1
63
1.04
41658--41700
18
2.4
18
92
0
68
20
27
13
37
1.91
44088--44119
16
2.0
16
100
0
64
37
18
6
37
1.76
52852--52882
5
6.2
5
100
0
62
19
41
19
19
1.90
56616--56685
30
2.3
30
82
4
79
32
10
8
48
1.67
56634--56693
30
2.0
31
83
3
77
33
10
10
46
1.71
56902--56944
17
2.4
17
88
7
59
39
0
0
60
0.97
57241--57282
19
2.2
19
87
8
59
78
0
11
9
0.96
57266--57291
12
2.2
12
100
0
52
84
0
7
7
0.77
57247--57291
21
2.0
23
91
8
76
80
0
11
8
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57241--57282
9
4.4
10
79
11
52
78
0
11
9
0.96

Tables:   1

The End!