Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006752.1 Hibiscus syriacus cultivar Beakdansim tig00017003_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59897

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6853--6895
21
2.0
22
86
4
61
11
2
25
60
1.43
7574--7698
64
1.9
65
83
6
164
32
20
17
30
1.95
10051--10123
36
2.0
36
91
0
119
41
6
23
28
1.80
10079--10191
46
2.5
45
85
4
165
40
7
21
30
1.80
15180--15218
17
2.3
17
86
0
60
58
0
0
41
0.98
15519--15548
3
10.0
3
92
0
51
63
0
3
33
1.11
17032--17080
3
16.0
3
87
4
71
63
2
0
34
1.06
17028--17079
25
2.1
25
96
0
95
59
1
0
38
1.08
17035--17076
22
1.9
22
95
0
75
61
2
0
35
1.09
17233--17393
76
2.1
76
93
2
270
36
21
19
22
1.95
17325--17438
45
2.5
45
89
2
174
33
21
21
22
1.97
17380--17590
76
2.8
76
97
0
395
35
21
21
22
1.96
17259--17514
121
2.1
121
94
1
442
34
21
21
22
1.97
17233--17984
197
3.8
196
90
4
1061
35
21
21
22
1.96
17446--17711
121
2.2
121
94
2
462
34
21
22
22
1.97
17522--17635
45
2.5
45
94
2
192
32
21
22
22
1.98
17569--17863
76
3.9
76
93
2
506
35
21
21
22
1.96
17380--18091
273
2.6
273
97
0
1352
35
21
21
22
1.96
17719--17984
121
2.2
121
96
1
487
34
20
21
22
1.97
17805--17908
45
2.3
45
98
0
199
33
19
23
24
1.97
17842--18091
76
3.3
76
96
1
450
36
21
20
22
1.95
17766--18144
152
2.5
154
70
13
406
35
21
20
22
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18039--18122
31
2.8
31
94
3
145
36
23
17
21
1.94
18821--18898
22
3.5
22
87
3
111
38
14
12
34
1.84
21438--21775
115
2.9
115
93
0
561
31
19
14
34
1.92
25952--25983
14
2.4
14
94
5
57
59
9
15
15
1.60
27982--28024
17
2.5
18
81
7
54
74
0
2
23
0.93
28020--28060
20
2.0
21
85
4
57
65
0
9
24
1.22
28498--28536
17
2.3
17
86
0
60
58
0
0
41
0.98
28535--28757
114
2.0
108
81
6
250
46
8
8
35
1.66
30356--30396
3
14.0
3
87
5
57
63
2
0
34
1.08
37529--37654
43
3.0
44
84
5
127
39
19
11
29
1.87
37541--37737
42
4.7
42
74
10
170
36
19
14
29
1.91
37707--37768
31
2.0
31
90
0
97
46
19
11
22
1.81
41181--41207
13
2.1
13
100
0
54
40
7
14
37
1.74
42443--42470
2
14.0
2
100
0
56
50
0
0
50
1.00
42888--42978
43
2.1
43
85
0
119
42
18
10
27
1.84
42940--43085
42
3.5
42
74
14
124
31
19
17
32
1.94
43056--43115
30
2.0
30
86
0
84
46
23
10
20
1.80
49331--49358
11
2.5
11
100
0
56
28
7
25
39
1.82
50980--51022
11
3.9
11
93
0
68
27
4
18
48
1.68
56916--57705
390
2.0
388
89
7
1219
32
17
18
31
1.94
56351--58269
955
2.0
953
96
2
3536
32
17
18
31
1.94

Tables:   1

The End!