Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006753.1 Hibiscus syriacus cultivar Beakdansim tig00017008_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74723

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6407--6462
3
18.7
3
78
7
60
41
0
0
58
0.98
6409--6462
15
3.6
15
87
9
83
42
0
0
57
0.98
6469--6520
26
2.0
26
88
0
77
42
28
17
11
1.84
14571--14619
24
2.0
24
96
0
89
42
22
14
20
1.88
15232--15451
114
1.9
114
92
1
370
34
15
20
29
1.94
16396--16572
76
2.3
76
79
7
189
32
18
22
27
1.97
17914--17968
22
2.5
22
87
0
83
38
9
12
40
1.75
18640--18971
75
4.4
76
93
1
569
22
20
22
33
1.97
18640--18971
151
2.2
151
93
1
567
22
20
22
33
1.97
18919--19032
45
2.5
45
85
2
156
21
22
25
30
1.99
18844--19096
121
2.1
119
91
1
416
22
21
22
33
1.97
18964--19167
75
2.7
75
93
1
336
22
20
23
34
1.97
18768--19171
196
2.1
196
94
0
709
22
20
22
34
1.97
19326--19384
3
19.7
3
79
6
66
40
0
0
59
0.97
19326--19384
18
3.4
18
86
11
88
40
0
0
59
0.97
19391--19445
26
2.1
26
90
6
85
41
29
18
10
1.84
32701--32740
2
20.0
2
100
0
80
50
0
0
50
1.00
33330--33365
16
2.2
17
90
5
56
52
0
0
47
1.00
33489--33615
50
2.5
51
77
1
139
18
31
27
22
1.97
34026--34516
162
3.0
160
92
2
820
31
7
23
37
1.83
35774--35843
20
3.3
20
66
11
59
28
8
5
57
1.52
35794--35866
23
3.3
23
66
11
71
26
6
2
64
1.32
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35773--35882
43
2.6
43
100
0
220
30
8
5
55
1.52
35799--35867
20
3.3
20
65
11
57
28
5
2
62
1.33
39740--39819
31
2.7
30
76
5
90
36
13
3
46
1.62
40553--40605
28
2.0
27
85
7
72
35
1
1
60
1.19
40790--40822
17
1.9
17
88
11
50
42
0
6
51
1.26
45268--45299
3
10.7
3
100
0
64
68
0
0
31
0.90
52667--52704
9
4.2
9
83
9
51
44
47
0
7
1.32
53262--53314
20
2.7
20
90
0
79
30
33
20
15
1.93
60259--60304
19
2.3
20
92
3
76
15
19
21
43
1.87
61987--62067
31
2.6
29
75
14
74
19
13
14
51
1.75
62067--62116
24
2.2
22
82
13
57
42
2
2
54
1.23
62066--62117
23
2.2
25
77
19
58
40
1
1
55
1.22
67129--67159
16
1.9
16
93
0
53
35
3
0
61
1.12
68517--68546
15
2.1
15
93
6
53
26
13
6
53
1.64
73943--74013
25
2.7
27
83
10
78
46
7
5
40
1.54

Tables:   1

The End!