Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006755.1 Hibiscus syriacus cultivar Beakdansim tig00017031_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79184

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1517--1554
20
1.9
20
94
0
67
18
15
34
31
1.92
10784--10827
21
2.1
21
86
0
61
6
43
15
34
1.74
11518--11555
19
2.0
19
100
0
76
42
0
21
36
1.53
13646--13705
28
2.1
28
100
0
120
26
13
20
40
1.89
14728--14760
17
1.9
17
93
0
57
27
39
18
15
1.90
14712--14870
64
2.5
63
87
9
209
30
25
20
24
1.99
14842--14890
19
2.6
19
84
9
57
24
28
20
26
1.99
14712--14890
64
2.8
61
80
15
186
29
25
20
25
1.99
17643--17667
12
2.1
12
100
0
50
24
32
16
28
1.96
20591--20750
65
2.5
65
88
5
227
26
18
22
31
1.97
22632--22693
28
2.2
28
88
0
97
25
19
19
35
1.95
27542--27583
2
21.0
2
100
0
84
50
0
0
50
1.00
38201--38256
22
2.7
22
89
8
82
25
17
32
25
1.97
38201--38275
20
3.7
20
84
11
82
25
17
33
24
1.96
38146--38342
95
2.1
94
82
6
229
29
14
26
28
1.95
38666--39093
57
7.5
57
91
1
642
36
11
19
32
1.88
39014--39157
59
2.5
58
81
5
148
32
11
18
37
1.86
39441--39598
81
2.0
81
81
0
190
37
11
23
27
1.89
43417--43470
19
2.6
21
75
11
58
24
14
33
27
1.94
43884--44654
57
13.5
57
92
1
1224
36
11
19
32
1.88
44562--44722
58
2.8
58
83
4
173
33
9
20
36
1.85
47622--47663
16
2.6
16
81
7
50
69
0
16
14
1.20
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57335--57384
17
2.9
17
78
0
55
42
8
12
38
1.71
63685--63734
17
2.9
17
87
0
73
42
6
14
38
1.70
69690--69748
15
3.8
15
78
14
66
18
18
16
45
1.85
72559--72626
31
2.2
31
92
2
111
38
19
11
30
1.87
73526--73573
17
2.7
18
80
6
62
25
52
22
0
1.48
73524--73569
23
1.9
24
91
8
76
21
52
26
0
1.47
73526--73590
6
11.0
6
91
3
69
32
50
16
0
1.46
73588--73659
6
12.2
6
91
2
119
48
15
1
34
1.54
78557--78592
2
18.0
2
94
0
63
0
0
47
52
1.00

Tables:   1

The End!