Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006757.1 Hibiscus syriacus cultivar Beakdansim tig00017044_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62008

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2281--2528
46
5.4
46
84
5
154
26
21
13
38
1.91
2354--2537
46
4.0
45
92
2
305
24
21
14
40
1.90
2311--2530
91
2.4
89
86
4
289
25
21
14
38
1.92
2362--2537
91
1.9
91
95
2
318
24
21
13
40
1.89
4628--4745
32
3.8
31
85
6
150
34
18
15
31
1.92
4624--4763
64
2.2
61
80
9
165
35
17
16
30
1.92
8218--8387
32
5.4
32
80
4
159
31
18
17
32
1.95
8251--8405
32
4.9
32
74
11
122
32
17
16
33
1.93
8251--8405
64
2.4
64
78
9
190
32
17
16
33
1.93
25593--25630
17
2.2
17
86
9
51
60
0
2
36
1.11
25685--25717
17
1.9
17
88
11
50
72
12
3
12
1.23
32361--32452
45
2.0
45
100
0
184
28
10
15
45
1.79
36698--36750
21
2.5
21
87
0
70
28
15
16
39
1.89
38234--38337
45
2.3
45
83
3
120
37
17
15
29
1.90
38319--38356
19
2.0
20
89
5
60
28
13
26
31
1.93
42884--42974
40
2.4
37
83
9
112
21
26
24
27
1.99
48510--48556
24
2.0
22
88
8
67
23
8
8
59
1.54
49717--49755
20
2.0
20
94
0
69
23
15
15
46
1.83
54865--54936
23
3.0
23
85
4
90
56
1
1
40
1.16
54911--54944
15
2.1
17
89
10
54
58
0
2
38
1.13

Tables:   1

The End!