Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006767.1 Hibiscus syriacus cultivar Beakdansim tig00017099_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61007

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
398--508
24
4.6
24
80
0
114
25
8
14
52
1.69
400--508
48
2.3
48
81
0
128
25
7
14
52
1.68
9000--9039
21
1.9
21
89
0
62
30
7
7
55
1.56
12080--12116
10
4.0
10
80
20
53
21
18
18
40
1.91
12079--12121
17
2.5
17
92
0
77
20
16
23
39
1.92
12143--12183
21
2.0
21
90
0
64
17
31
29
21
1.96
14411--14512
24
4.2
24
83
0
105
24
9
13
51
1.71
34024--34288
108
2.4
108
88
4
356
39
14
18
27
1.89
34444--34546
3
34.0
3
86
1
116
28
1
5
64
1.28
38387--39665
443
2.9
439
80
5
1312
29
17
17
35
1.93
44719--44754
3
12.0
3
93
0
63
63
0
36
0
0.94
44719--44766
12
4.0
12
91
0
60
58
0
39
2
1.10
52298--52338
14
3.0
14
83
16
59
78
0
14
7
0.96
54527--54617
42
2.2
41
84
2
119
25
19
23
31
1.98
54689--54723
16
2.2
16
89
0
52
60
2
2
34
1.26
54780--54872
42
2.2
41
86
1
123
23
24
21
30
1.99
54946--54976
16
2.0
15
93
6
53
54
6
6
32
1.51
54374--55339
257
3.8
260
88
1
1419
35
15
15
33
1.90
55454--55487
3
11.3
3
100
0
68
32
0
0
67
0.91

Tables:   1

The End!