Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006771.1 Hibiscus syriacus cultivar Beakdansim tig00017107_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50176

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11202--11244
21
2.0
21
86
0
59
34
25
11
27
1.91
16606--17309
158
4.5
157
89
3
1022
29
19
5
45
1.72
23421--23468
7
6.7
7
83
4
51
22
0
2
75
0.91
23420--23476
15
3.9
14
77
11
53
24
0
1
73
0.92
23671--23728
31
1.9
29
89
6
89
25
10
24
39
1.87
24851--24877
14
1.9
14
100
0
54
66
0
0
33
0.92
25024--25051
14
2.0
14
100
0
56
28
7
0
64
1.20
25645--25724
25
3.3
23
77
22
69
42
6
0
51
1.27
25665--25724
25
2.4
24
89
8
93
41
3
0
55
1.16
25637--25741
26
4.1
26
78
14
92
41
4
0
53
1.22
25718--25763
20
2.3
21
78
17
53
41
2
2
54
1.25
26617--26650
3
11.0
3
93
6
59
2
32
0
64
1.08
42035--42268
32
7.3
32
93
0
360
29
23
13
33
1.93
44167--44197
15
2.1
15
93
0
53
41
6
3
48
1.45
44935--45003
30
2.3
30
100
0
138
11
14
7
66
1.43

Tables:   1

The End!