Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006775.1 Hibiscus syriacus cultivar Beakdansim tig00017126_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75198

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
255--289
18
1.9
18
94
0
61
54
25
2
17
1.57
586--662
33
2.3
34
90
2
120
38
25
14
20
1.91
634--740
20
5.4
20
85
4
137
32
20
17
28
1.96
806--848
22
2.0
22
90
0
68
39
20
16
23
1.92
2340--2448
41
2.6
42
78
7
114
22
19
35
22
1.96
2340--2452
21
5.4
21
70
6
77
23
19
35
22
1.96
3026--3170
20
7.7
19
79
11
86
15
20
22
41
1.90
3063--3223
20
8.4
20
76
12
133
16
17
24
40
1.90
3026--3244
112
2.0
112
87
1
323
16
17
23
42
1.89
3774--3809
18
1.9
19
94
5
65
11
11
47
30
1.74
5548--5599
22
2.4
22
93
0
86
19
11
44
25
1.84
5741--5795
21
2.6
21
94
0
92
23
16
20
40
1.91
5783--5855
20
3.7
20
92
0
128
26
19
28
26
1.98
10362--10420
30
2.0
30
80
9
68
57
1
6
33
1.35
13524--13586
26
2.3
26
76
13
65
65
6
1
26
1.26
16750--16822
33
2.2
33
80
11
87
16
35
8
39
1.78
24636--24743
30
3.7
29
83
3
135
40
8
11
39
1.71
30496--30534
15
2.6
15
91
0
60
51
7
10
30
1.64
36776--36823
24
2.0
23
88
11
71
60
2
0
37
1.09
40868--40912
2
22.5
2
100
0
90
51
0
0
48
1.00
40911--40993
40
2.1
40
97
0
157
40
8
7
43
1.63
43396--43580
31
6.0
31
96
1
327
18
19
23
38
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47806--47990
31
6.0
31
97
1
336
19
19
22
38
1.93
50252--50294
18
2.4
18
88
0
59
27
6
32
32
1.84
60438--60552
57
2.0
57
100
0
230
41
10
13
33
1.79

Tables:   1

The End!