Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006780.1 Hibiscus syriacus cultivar Beakdansim tig00017181_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62718

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12240--12288
22
2.2
22
96
0
89
30
16
10
42
1.81
12697--12866
82
2.1
82
85
4
227
30
21
18
30
1.97
12729--12855
41
3.1
40
72
16
125
27
21
18
32
1.97
12747--12875
41
3.1
41
74
14
131
28
20
20
29
1.98
13277--13318
14
2.7
15
85
14
59
47
0
4
47
1.23
13642--13677
14
2.6
14
95
0
63
69
5
5
19
1.29
15893--15952
29
2.1
29
100
0
120
35
38
0
26
1.57
17627--17684
20
2.9
20
82
10
73
32
15
22
29
1.95
17716--17790
21
3.6
21
74
0
60
38
18
21
21
1.93
17700--17795
42
2.3
41
81
1
111
34
19
19
26
1.96
19126--19169
23
1.9
23
85
0
61
68
4
25
2
1.20
22066--22105
15
2.7
15
88
7
55
35
5
37
22
1.76
52057--52092
12
3.0
12
83
0
54
50
16
25
8
1.73
53009--53068
27
2.2
28
85
11
88
23
13
20
43
1.86
58102--58150
18
2.5
20
78
18
59
44
4
0
51
1.20

Tables:   1

The End!