Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006782.1 Hibiscus syriacus cultivar Beakdansim tig00017184_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84751

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17999--18050
18
2.9
18
73
0
50
28
28
26
15
1.96
17981--18050
36
1.9
36
82
0
86
27
30
27
15
1.96
21512--21591
36
2.2
36
93
0
133
45
17
18
18
1.86
22518--25094
4
648.8
4
98
1
5019
25
0
25
49
1.50
26285--26687
201
2.0
201
99
0
797
36
16
21
26
1.94
31794--31845
3
17.3
3
100
0
104
32
0
0
67
0.91
33099--33167
23
3.0
23
82
0
66
30
24
23
21
1.99
39990--40081
23
4.0
23
86
0
121
29
23
25
21
1.99
42673--42723
15
3.4
15
97
0
93
17
27
27
27
1.98
49178--49210
8
4.2
8
88
3
50
9
30
0
60
1.27
50126--50164
20
1.9
21
94
5
71
28
10
30
30
1.90
56198--56257
30
2.0
31
83
3
77
36
3
15
45
1.62
58250--58305
29
1.9
29
85
0
76
48
5
8
37
1.58
59105--59131
13
2.1
13
100
0
54
22
7
40
29
1.81
65406--65485
30
2.7
30
90
3
117
33
3
13
48
1.61
65910--65959
18
2.8
19
85
8
70
34
0
0
66
0.92
65901--65973
27
2.7
26
81
8
83
30
0
1
68
0.98
69910--69955
7
6.0
7
81
18
56
39
30
17
13
1.87
69912--69955
16
2.8
16
100
0
88
38
29
18
13
1.89
70194--70223
3
10.3
3
92
7
53
70
0
0
30
0.88
73020--73059
20
2.0
20
90
4
64
37
0
0
62
0.95
73080--73119
17
2.2
19
82
13
57
37
2
0
60
1.11
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
73079--73116
16
2.4
17
86
8
53
36
2
0
60
1.11
75094--75135
21
2.0
21
85
0
57
42
4
21
30
1.73
75364--75450
31
2.8
30
84
3
102
45
5
4
43
1.48
76104--76189
33
2.7
30
78
15
84
46
0
2
51
1.13
76116--76162
17
2.8
17
87
3
69
44
0
0
55
0.99
76150--76185
18
2.0
18
88
0
54
38
0
0
61
0.96
80677--80724
22
2.2
21
82
10
53
60
12
0
27
1.32
81094--81126
2
16.5
2
100
0
66
51
0
0
48
1.00

Tables:   1

The End!