Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006783.1 Hibiscus syriacus cultivar Beakdansim tig00017185_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55606

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
781--826
15
2.9
16
83
6
67
69
0
4
26
1.07
1034--1080
17
2.7
18
90
3
69
55
2
25
17
1.53
1330--1412
33
2.5
32
84
11
98
69
1
4
24
1.14
2964--3635
103
6.6
105
86
9
834
22
18
26
32
1.97
3075--3635
103
5.5
105
90
6
840
21
18
26
33
1.96
13798--13841
6
7.2
6
80
14
54
79
2
0
18
0.83
13798--13842
15
2.9
16
80
6
65
77
2
0
20
0.87
13798--13858
31
2.0
30
83
3
77
75
3
4
16
1.11
14860--14899
16
2.4
16
87
4
53
70
0
5
25
1.08
15118--15165
19
2.5
19
96
0
87
54
4
22
18
1.61
15230--15265
16
2.2
17
90
5
56
55
2
0
41
1.14
15417--15505
20
4.6
20
73
18
64
69
1
4
24
1.14
15451--15508
16
3.8
15
76
14
57
68
1
1
27
1.08
18294--18325
3
10.7
3
100
0
64
34
0
0
65
0.93
22129--22178
26
1.9
26
87
0
73
56
0
0
44
0.99
22130--22245
38
3.0
39
80
12
123
45
3
0
50
1.24
22133--22324
75
2.6
73
81
6
208
43
6
2
46
1.43
22153--22325
37
4.6
37
82
7
188
41
7
2
48
1.46
22291--22339
25
2.0
25
95
0
89
40
6
2
51
1.38
22293--22348
25
2.3
24
84
6
78
44
8
1
44
1.45
31721--31920
37
5.4
38
86
7
279
41
7
3
49
1.45
32958--32990
15
2.2
15
100
0
66
12
21
0
66
1.23
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33913--33969
21
2.7
21
86
5
71
45
1
3
49
1.29
33882--33943
26
2.4
28
76
13
69
53
3
0
43
1.17
33986--34241
22
11.2
22
74
11
171
43
9
2
44
1.49
33984--34241
24
11.2
24
75
12
202
43
9
2
44
1.49
33884--34146
115
2.3
115
83
9
329
43
8
2
45
1.48
33996--34216
45
4.8
46
80
9
247
43
10
2
43
1.51
33985--34216
91
2.5
91
88
4
360
43
10
2
44
1.50
36322--36377
19
3.2
16
76
16
58
39
19
10
30
1.86
36679--36731
19
2.6
20
76
11
54
30
20
11
37
1.88
41899--41934
16
2.2
16
95
0
63
38
16
0
44
1.48
42549--42623
23
3.3
23
75
7
71
37
20
22
20
1.94
42550--42646
46
2.1
46
88
0
140
35
19
23
21
1.96
42562--42646
23
3.7
23
80
0
89
35
18
24
21
1.96
51298--51364
23
2.9
23
84
2
71
26
13
25
34
1.93

Tables:   1

The End!