Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006786.1 Hibiscus syriacus cultivar Beakdansim tig00017200_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73385

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2612--2922
54
5.7
54
74
14
194
30
10
17
41
1.83
2663--2922
112
2.4
109
87
7
359
31
10
17
40
1.82
3114--3280
39
4.3
39
87
4
241
32
16
16
34
1.91
14700--14737
8
4.8
8
81
12
51
84
0
13
2
0.73
14681--14736
15
3.7
15
81
11
69
82
0
16
1
0.76
14688--14728
19
2.1
20
90
4
66
82
0
14
2
0.76
14684--14735
12
4.2
12
79
13
61
82
0
15
1
0.75
15673--16493
136
6.1
136
84
4
903
36
16
20
26
1.93
16690--16737
18
2.7
18
86
0
69
54
41
0
4
1.20
21175--21207
16
2.1
16
100
0
66
45
18
0
36
1.49
23265--23303
20
2.0
20
84
0
51
23
7
23
46
1.78
23484--23548
23
2.9
23
80
15
82
18
26
32
23
1.97
23484--23544
20
2.9
21
87
7
79
18
26
34
21
1.96
35857--35889
2
16.5
2
100
0
66
51
0
0
48
1.00
35977--36068
36
2.5
37
82
3
114
33
14
21
30
1.93
37917--38199
152
1.9
152
92
1
478
36
13
22
27
1.91
42602--42630
5
5.8
5
100
0
58
82
0
0
17
0.66
45279--45391
46
2.5
45
85
7
149
32
21
7
38
1.80
47455--47539
11
7.2
11
72
22
66
31
36
3
28
1.74
47452--47553
36
2.9
36
94
1
170
32
36
4
26
1.78
47453--47569
36
3.4
34
85
11
130
30
36
3
29
1.74
47453--47592
36
4.1
33
84
9
88
30
36
2
30
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51958--52042
11
7.2
11
72
22
66
31
36
3
28
1.74
51955--52056
36
2.9
36
94
1
170
32
36
4
26
1.78
51956--52072
36
3.4
34
85
11
130
30
36
3
29
1.74
51956--52095
36
4.1
33
84
9
88
30
36
2
30
1.72
54120--54172
17
3.1
17
86
0
70
35
15
7
41
1.75
59919--59964
11
4.1
11
85
2
56
69
6
13
10
1.35

Tables:   1

The End!