Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006788.1 Hibiscus syriacus cultivar Beakdansim tig00017204_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80974

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2213--2257
13
3.7
12
82
11
56
0
20
2
77
0.87
2212--2263
8
6.6
7
80
20
50
0
19
1
78
0.84
21673--21714
18
2.3
18
88
8
59
0
14
4
80
0.86
21968--22025
20
2.8
20
89
7
82
68
1
17
12
1.28
22044--22084
22
1.9
21
85
5
55
26
4
36
31
1.78
23904--23983
35
2.2
37
88
4
119
30
38
3
27
1.74
29147--29226
35
2.2
37
86
4
110
31
37
3
27
1.74
34795--34845
19
2.6
20
87
3
68
45
5
15
33
1.71
36665--36776
36
3.1
35
91
3
179
30
38
3
27
1.74
36910--36939
15
1.9
16
93
6
53
16
26
0
56
1.40
37148--37194
25
2.0
24
84
16
62
74
8
17
0
1.05
40706--40817
36
3.1
35
91
3
179
30
38
3
27
1.74
40951--40980
15
1.9
16
93
6
53
16
26
0
56
1.40
41189--41235
25
2.0
24
84
16
62
74
8
17
0
1.05
41847--41887
20
2.1
20
86
4
57
46
7
9
36
1.65
42783--42842
30
2.0
31
83
3
77
51
10
10
28
1.67
45572--45611
19
2.0
20
90
4
64
65
0
15
20
1.28
46024--46066
19
2.2
20
87
4
61
48
6
9
34
1.62
58357--58409
23
2.2
24
90
3
81
64
11
15
9
1.50
58366--58414
23
2.1
23
88
7
73
61
12
18
8
1.55
64582--64644
24
2.6
22
79
16
63
66
9
15
7
1.42

Tables:   1

The End!