Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006795.1 Hibiscus syriacus cultivar Beakdansim tig00017241_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64997

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
857--1177
84
3.8
85
74
7
260
36
8
18
37
1.80
878--1176
166
1.8
166
85
1
429
36
8
18
36
1.81
10512--10802
111
2.6
114
76
9
285
25
19
15
39
1.90
11418--11707
67
4.4
67
77
8
297
38
10
16
34
1.82
11468--11703
130
1.8
128
86
3
339
37
9
16
36
1.81
11276--11707
197
2.2
197
87
4
595
40
8
16
34
1.80
15118--15163
19
2.4
18
82
10
56
52
19
13
15
1.75
15073--15164
26
3.5
26
69
16
73
48
18
18
14
1.80
15126--15164
19
2.0
20
90
5
62
53
20
12
12
1.71
16830--16870
21
2.0
21
85
0
55
14
26
34
24
1.94
16914--16938
11
2.3
11
100
0
50
40
0
8
52
1.31
19482--19542
19
3.1
19
83
7
77
16
27
31
24
1.96
27148--27186
19
2.1
19
85
0
51
61
7
5
25
1.44
27598--27658
22
2.7
22
77
22
56
77
3
16
3
1.04
31111--31155
18
2.4
20
82
14
60
51
40
4
4
1.42
37743--37776
9
4.0
9
85
14
54
29
0
0
70
0.87
41468--41553
7
11.3
7
75
17
57
81
0
12
5
0.86
41468--41553
8
11.1
8
75
9
63
81
0
12
5
0.86
41449--41541
23
4.2
23
74
15
79
79
0
10
9
0.93
41449--41544
32
3.1
30
75
18
88
79
0
11
9
0.95
41468--41548
40
2.0
40
81
9
94
81
0
12
6
0.86
43542--43862
109
2.9
108
84
7
385
30
9
17
41
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43471--43862
57
6.9
57
76
9
308
31
11
17
40
1.84
44054--44221
39
4.3
39
88
3
250
32
16
16
34
1.91
45744--45809
4
16.8
4
75
13
57
19
3
3
74
1.09
45799--45824
9
2.9
9
100
0
52
34
0
0
65
0.93
55691--55728
8
4.8
8
81
12
51
84
0
13
2
0.73
55672--55727
15
3.7
15
81
11
69
82
0
16
1
0.76
55679--55719
19
2.1
20
90
4
66
82
0
14
2
0.76
55675--55726
12
4.2
12
79
13
61
82
0
15
1
0.75
56722--57576
136
6.3
136
87
1
1000
36
16
19
26
1.94
57774--57824
18
2.8
18
81
3
66
54
39
1
3
1.30
62285--62317
16
2.1
16
100
0
66
45
18
0
36
1.49
64567--64629
20
2.9
22
81
11
76
19
26
30
23
1.98

Tables:   1

The End!