Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006796.1 Hibiscus syriacus cultivar Beakdansim tig00017242_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74196

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1497--1588
21
4.4
21
72
4
60
21
17
36
23
1.94
1497--1588
42
2.2
42
84
3
114
21
17
36
23
1.94
1511--1619
42
2.6
42
76
2
112
24
18
36
20
1.94
2099--2167
20
3.5
20
87
0
93
34
23
18
23
1.96
2210--2262
19
2.7
20
82
5
63
26
20
16
35
1.94
2210--2364
20
7.6
20
75
13
111
18
20
21
40
1.91
4252--4305
20
2.7
20
88
0
81
38
25
18
16
1.92
4662--4713
22
2.4
22
93
0
86
23
13
40
23
1.89
4654--4718
22
3.0
21
82
10
78
21
13
38
26
1.91
4915--5026
39
2.8
39
94
1
188
20
19
20
39
1.93
4915--5026
20
5.7
20
92
2
190
20
19
20
39
1.93
5023--5068
21
2.2
21
88
0
65
36
17
28
17
1.92
9637--9677
16
2.7
15
92
7
66
48
12
21
17
1.79
11913--12009
51
1.9
51
93
0
167
35
12
20
31
1.90
13763--13806
16
2.9
16
93
6
74
47
13
20
18
1.82
15543--15641
50
2.0
50
95
0
180
17
21
7
54
1.66
18659--18755
51
1.9
51
93
0
167
35
12
20
31
1.90
20512--20552
16
2.7
16
92
7
68
48
12
19
19
1.80
22288--22386
50
2.0
50
95
0
180
17
21
7
54
1.66
30119--30157
12
3.3
11
86
13
51
28
17
15
38
1.91
30261--30371
38
2.9
39
82
6
129
21
27
23
27
1.99
31400--31441
9
4.7
9
87
0
57
47
19
9
23
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32668--32725
30
1.9
30
85
0
80
37
17
5
39
1.72
33189--33222
17
2.1
16
88
5
50
76
0
8
14
1.01
33697--33743
24
2.0
24
83
8
60
57
12
2
27
1.47
37036--37079
20
2.2
20
84
4
63
65
0
15
18
1.27
43438--43471
17
2.1
16
88
5
50
76
0
8
14
1.01
43946--43992
24
2.0
24
83
8
60
57
12
2
27
1.47
52850--52935
15
6.1
14
71
13
61
12
12
0
74
1.08
55457--55500
12
3.7
12
90
0
70
27
18
15
38
1.91
55607--55716
38
2.9
38
86
0
139
23
27
22
26
2.00
57279--57320
12
3.5
12
90
0
66
28
14
16
40
1.88
57427--57536
38
2.9
38
87
0
148
24
27
23
24
2.00
59083--59126
12
3.7
12
87
0
61
27
18
13
40
1.88
59243--59342
38
2.6
38
85
0
128
27
28
21
24
1.99
60221--60413
76
2.6
76
91
4
302
29
25
20
25
1.99
60373--60450
20
3.7
21
79
16
81
25
32
17
24
1.97
60375--60450
22
3.7
20
80
15
82
25
32
18
23
1.97
64611--64836
103
2.2
103
99
0
443
25
14
24
35
1.94
64845--64907
23
2.7
23
92
0
99
19
28
26
25
1.98
69539--69659
62
1.9
65
80
11
144
33
23
16
27
1.96
70371--70597
100
2.2
102
90
4
354
25
14
23
36
1.93
70597--70658
22
2.7
23
85
5
81
19
29
25
25
1.99

Tables:   1

The End!