Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006797.1 Hibiscus syriacus cultivar Beakdansim tig00017244_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62740

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1864--1898
16
2.1
17
94
5
63
42
20
0
37
1.52
10801--10827
14
1.9
14
100
0
54
14
14
22
48
1.81
14960--15078
35
3.3
36
84
5
152
42
18
6
31
1.76
17448--17495
20
2.4
20
96
0
87
14
35
8
41
1.76
19561--19679
35
3.3
36
87
6
161
44
19
3
32
1.67
19608--19672
20
3.5
20
67
28
61
46
18
4
30
1.69
31704--31815
35
3.2
35
89
0
170
42
19
0
36
1.58
32870--32983
35
3.2
35
87
4
158
34
0
21
42
1.59
34357--34417
21
2.9
21
78
4
61
18
11
4
65
1.42
38322--38364
15
2.8
16
82
6
54
74
2
16
6
1.14
38332--38421
34
2.6
33
81
16
96
74
2
15
7
1.14
38353--38409
22
2.5
23
80
13
64
73
1
17
7
1.14
38355--38410
28
2.0
27
86
10
78
75
1
16
7
1.11
38377--38419
18
2.4
18
84
3
61
79
0
16
4
0.90
38345--38421
33
2.3
35
86
8
106
75
1
15
7
1.09
41954--42035
40
2.0
40
95
0
146
25
17
24
32
1.96
42140--42312
47
3.8
45
90
3
249
36
7
22
32
1.82
43351--43380
2
15.0
2
100
0
60
50
0
0
50
1.00
44389--44421
13
2.4
14
90
5
50
78
0
0
21
0.75
46011--46050
18
2.2
18
86
0
53
77
2
0
20
0.88
46100--46473
38
10.3
36
80
11
360
45
7
1
45
1.42
62557--62634
35
2.2
34
88
8
113
26
2
37
33
1.70

Tables:   1

The End!