Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006798.1 Hibiscus syriacus cultivar Beakdansim tig00017247_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27971

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2828--2860
4
8.2
4
100
0
66
27
0
24
48
1.51
3030--3125
31
3.1
30
75
12
88
27
18
20
33
1.96
3081--3210
30
4.3
30
89
1
179
23
16
24
34
1.95
6475--6635
64
2.5
63
81
5
180
31
19
24
24
1.98
6604--6680
20
3.7
20
75
14
66
27
22
25
24
2.00
7707--7802
31
3.1
30
71
12
79
27
19
20
32
1.97
7785--7887
30
3.4
30
90
0
161
23
18
24
33
1.96
10919--10955
19
1.9
19
100
0
74
29
27
5
37
1.79
18437--18489
18
2.9
18
97
0
97
16
20
33
28
1.95
18891--18930
21
1.9
21
85
10
55
55
0
17
27
1.43
23034--23109
2
38.5
2
97
2
145
50
0
0
50
1.00
23627--23676
20
2.4
21
93
3
84
32
22
6
40
1.78
24913--24944
16
2.0
16
93
0
55
34
9
0
56
1.32

Tables:   1

The End!