Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006799.1 Hibiscus syriacus cultivar Beakdansim tig00017248_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50747

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1888--1959
34
2.2
33
82
7
83
1
16
6
75
1.10
4455--4498
21
2.2
20
84
12
54
52
6
0
40
1.28
4906--5290
81
4.8
81
82
2
429
28
22
13
36
1.91
4908--5271
160
2.3
162
83
2
430
28
22
13
34
1.92
5997--6051
20
2.8
20
81
10
76
25
25
16
32
1.96
7163--7250
46
2.0
44
88
4
131
26
18
26
29
1.98
7272--7309
20
1.9
20
94
0
67
18
15
34
31
1.92
15816--15867
19
2.7
19
100
0
104
21
17
30
30
1.96
21943--21967
13
1.9
13
100
0
50
52
16
0
32
1.44
22822--22892
20
3.2
22
70
23
60
45
2
5
46
1.41
22847--23024
90
2.0
90
94
0
311
44
7
10
37
1.67
28631--29421
93
8.5
93
81
1
863
35
18
10
36
1.84
28625--29421
279
2.9
279
83
2
985
35
18
10
36
1.84
30950--31056
2
55.5
2
90
7
177
52
0
0
47
1.00
30950--31056
19
5.6
20
88
10
161
52
0
0
47
1.00
31113--31157
21
2.1
21
88
8
65
64
4
0
31
1.13
32645--32671
3
9.0
3
100
0
54
66
0
0
33
0.92
44996--45047
24
2.2
24
85
0
68
36
11
15
36
1.84
47320--47356
19
1.9
19
100
0
74
10
5
35
48
1.61
49888--49929
14
2.9
15
86
6
52
47
0
11
40
1.40

Tables:   1

The End!