Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006800.1 Hibiscus syriacus cultivar Beakdansim tig00017257_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48622

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
270--379
31
3.6
31
77
10
102
30
30
20
19
1.97
3232--3280
12
4.4
11
77
12
55
32
0
0
67
0.91
3232--3288
13
4.9
12
79
12
50
31
1
0
66
1.02
9608--9655
19
2.5
19
100
0
96
31
12
29
27
1.93
10206--10238
15
2.2
15
94
0
57
15
21
33
30
1.94
21984--22008
9
2.8
9
100
0
50
32
20
36
12
1.89
31934--31967
14
2.5
14
95
4
61
41
8
14
35
1.77
32337--32379
23
2.0
22
86
9
61
51
9
9
30
1.65
37965--38015
22
2.3
22
82
3
57
29
19
15
35
1.93

Tables:   1

The End!