Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006803.1 Hibiscus syriacus cultivar Beakdansim tig00017267_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53275

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1887--1939
2
28.0
2
88
11
85
49
0
0
50
1.00
8738--8812
28
2.7
28
93
0
132
32
32
14
21
1.93
8857--8915
21
2.8
21
78
0
64
37
23
15
23
1.93
17591--17632
14
2.9
15
86
13
61
78
0
21
0
0.75
23388--23433
18
2.7
16
84
15
65
36
0
0
63
0.95
23765--23815
22
2.3
22
96
0
93
35
7
13
43
1.73
31043--31151
3
36.3
3
94
0
182
33
3
0
62
1.13
31150--31195
21
2.2
21
84
7
58
63
2
0
34
1.07
31721--31762
15
2.8
15
82
7
50
73
2
23
0
0.94
32299--32357
30
2.0
29
83
3
73
37
11
6
44
1.68
33304--33351
18
2.7
18
74
6
53
27
0
2
70
0.98
44392--44416
13
1.9
13
100
0
50
72
0
0
28
0.86
44383--44413
14
2.1
15
94
5
55
70
3
0
25
1.02
53004--53057
27
2.0
26
86
10
74
11
31
18
38
1.86

Tables:   1

The End!