Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006807.1 Hibiscus syriacus cultivar Beakdansim tig00017276_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56441

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1630--1660
15
2.0
16
93
6
55
16
12
32
38
1.86
31946--32003
12
4.8
12
84
0
80
15
15
18
50
1.79
31923--32003
24
3.4
24
81
3
83
19
14
18
46
1.83
42861--42900
14
2.8
15
79
20
50
47
0
0
52
1.00
42973--43015
22
2.0
21
81
4
50
58
6
2
32
1.38
44120--44188
34
2.0
35
88
2
104
47
24
8
18
1.77
44670--44749
18
4.5
18
75
10
67
5
12
28
53
1.59
44723--44749
8
3.4
8
100
0
54
0
14
22
62
1.31
53503--53603
30
3.1
30
67
20
85
12
14
21
50
1.77

Tables:   1

The End!