Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006814.1 Hibiscus syriacus cultivar Beakdansim tig00017317_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51617

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1293--1335
21
2.0
22
86
13
63
48
0
4
46
1.22
1782--1817
2
18.0
2
100
0
72
50
0
0
50
1.00
2409--2448
21
2.0
20
85
5
53
35
0
0
65
0.93
6719--6744
3
8.7
3
100
0
52
34
0
0
65
0.93
10706--10740
2
17.5
2
100
0
70
51
0
0
48
1.00
11234--11319
42
2.1
42
93
2
147
23
20
9
46
1.79
12612--12697
31
2.8
31
92
0
136
19
20
25
33
1.97
14977--15126
20
7.4
20
86
0
165
46
14
18
20
1.84
15471--15642
20
8.6
20
79
10
147
18
14
25
41
1.88
15506--15642
60
2.3
60
87
5
197
17
14
24
43
1.87
15611--15678
20
3.3
20
69
4
55
26
14
23
35
1.94
19143--19173
2
15.5
2
100
0
62
48
0
0
51
1.00
26125--26192
31
2.2
31
86
0
91
23
27
14
33
1.94
28205--28272
31
2.2
31
84
5
84
35
7
4
52
1.49
29388--29431
7
6.4
7
84
5
63
18
27
27
27
1.98
29388--29431
20
2.1
21
87
4
63
18
27
27
27
1.98
41100--41135
2
18.0
2
100
0
72
50
0
0
50
1.00
42376--42454
39
2.0
39
100
0
158
25
20
7
46
1.76
46032--46071
21
1.9
21
89
0
62
20
25
32
22
1.98
49250--49281
15
2.1
16
94
5
57
40
0
9
50
1.35

Tables:   1

The End!