Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006818.1 Hibiscus syriacus cultivar Beakdansim tig00017326_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71074

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5464--5511
17
2.8
17
84
12
62
20
4
4
70
1.21
17027--17821
105
7.7
105
94
2
1301
33
25
18
22
1.96
19151--19208
2
29.0
2
100
0
116
50
0
0
50
1.00
19337--19376
21
2.0
19
85
9
53
17
7
2
72
1.19
21577--21695
60
2.0
60
85
3
159
43
4
19
32
1.70
21605--21695
29
3.0
30
72
16
80
47
4
16
31
1.66
22623--22695
31
2.3
31
92
2
119
45
17
12
24
1.83
22680--22711
16
2.0
16
93
0
55
46
18
15
18
1.84
22748--22780
17
1.9
17
93
0
57
33
30
15
21
1.94
36146--36329
82
2.2
83
78
6
203
31
16
18
33
1.94
36297--36391
42
2.3
40
80
10
111
33
14
16
34
1.90
36522--36600
41
1.9
41
84
5
106
30
18
20
30
1.97
36639--36767
42
3.1
42
72
8
111
31
13
17
37
1.89
44496--44569
28
2.6
28
82
4
78
29
4
20
45
1.69
44492--44673
29
6.4
28
74
9
111
33
4
15
46
1.67
44487--44700
112
1.9
112
82
1
268
35
5
14
44
1.67
45614--45905
117
2.5
117
93
0
494
18
15
33
32
1.92
46861--46899
20
1.9
21
84
5
53
43
5
12
38
1.65
54611--54643
13
2.5
13
100
0
66
24
21
0
54
1.45
66314--66799
242
2.0
242
93
4
827
36
19
14
29
1.91

Tables:   1

The End!