Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006823.1 Hibiscus syriacus cultivar Beakdansim tig00017335_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52795

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3009--3044
16
2.2
17
95
5
65
27
8
27
36
1.86
13005--13081
26
3.1
25
75
11
86
77
0
12
9
0.98
13040--13081
9
4.8
9
77
16
52
80
0
11
7
0.88
13037--13070
17
2.1
17
94
5
61
79
0
14
5
0.91
14084--14705
55
11.3
55
91
0
947
30
14
26
28
1.95
14699--14856
55
2.9
54
85
6
205
31
20
24
24
1.98
15093--15159
2
33.5
2
100
0
134
50
0
0
49
1.00
18565--18614
19
2.6
18
84
9
55
28
2
8
62
1.35
19039--19223
93
2.0
92
94
1
325
25
14
21
38
1.91
22830--23300
235
2.0
235
98
0
906
29
23
16
30
1.96
25035--25087
3
18.3
3
75
21
51
66
0
28
5
1.15
25024--25096
29
2.6
28
79
14
71
63
0
28
8
1.23
25522--25578
3
19.3
3
96
3
107
68
0
0
31
0.90
26145--26249
40
2.6
40
79
5
113
52
11
9
26
1.68
27597--27636
21
1.9
21
100
0
80
40
15
25
20
1.90
27826--27903
2
39.0
2
100
0
156
50
0
0
50
1.00
28941--28972
16
2.0
16
93
0
55
53
0
9
37
1.34
29440--29492
20
2.7
20
82
8
65
15
3
7
73
1.20
35560--35598
19
2.1
19
86
13
55
30
5
5
58
1.41
36920--36951
12
2.7
12
100
0
64
9
46
15
28
1.77
40439--40499
19
3.2
19
85
0
77
21
29
31
18
1.96
40465--40507
19
2.3
19
83
0
50
18
34
30
16
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41427--41456
14
2.1
14
93
0
51
33
0
30
36
1.58
49635--49693
30
2.0
30
96
0
109
40
6
6
45
1.57
50688--50715
14
2.0
14
100
0
56
35
35
14
14
1.86

Tables:   1

The End!