Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006824.1 Hibiscus syriacus cultivar Beakdansim tig00017344_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67593

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
707--740
14
2.4
14
90
5
50
23
8
20
47
1.78
2457--2486
3
10.0
3
100
0
60
66
33
0
0
0.92
5365--5428
22
2.9
22
70
22
53
54
1
0
43
1.09
5473--5541
24
3.0
23
77
12
63
56
0
1
42
1.08
5896--5943
24
2.0
24
100
0
96
20
12
12
54
1.70
6260--6301
17
2.5
16
92
7
66
30
30
33
4
1.78
6425--6470
20
2.3
20
92
3
76
21
23
30
23
1.99
14023--14125
29
3.7
28
83
10
131
31
6
23
38
1.81
14028--14105
25
2.9
26
86
9
104
34
7
19
38
1.80
14028--14134
54
2.0
54
90
0
169
34
6
18
40
1.77
15470--15508
19
2.1
19
86
13
55
30
5
5
58
1.41
17867--17933
18
3.8
18
76
4
73
14
38
22
23
1.92
17941--18046
29
3.7
29
88
1
142
29
4
25
40
1.76
19390--19428
19
2.1
19
86
13
55
30
5
5
58
1.41
21788--21854
18
3.8
18
78
4
73
14
44
20
19
1.86
21862--21946
28
3.0
29
91
1
118
30
3
25
40
1.73
21863--21986
29
4.4
28
84
6
135
31
2
23
42
1.67
25687--25753
18
3.8
17
76
5
62
17
41
20
19
1.90
25762--25895
57
2.3
58
84
6
175
29
3
25
41
1.73
25761--25915
29
5.4
29
84
5
172
30
3
25
41
1.71
27229--27267
19
2.1
19
86
13
55
30
5
5
58
1.41
29624--29661
13
2.9
13
92
0
67
15
44
23
15
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29673--29807
29
4.7
29
84
0
162
30
4
23
41
1.74
29673--29824
58
2.7
58
82
2
164
32
4
22
40
1.74
29674--29826
29
5.4
28
83
3
110
32
4
21
41
1.73
31144--31182
19
2.1
19
86
13
55
30
5
5
58
1.41
40520--40596
23
3.3
23
75
7
66
32
22
19
25
1.97
45212--45247
2
18.0
2
100
0
72
50
0
0
50
1.00
52152--52266
44
2.6
44
97
0
221
40
8
21
28
1.83
60266--60317
23
2.4
22
84
9
70
34
26
17
21
1.95
63379--63420
22
2.0
21
90
4
66
50
9
11
28
1.70

Tables:   1

The End!