Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006827.1 Hibiscus syriacus cultivar Beakdansim tig00017356_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64561

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1314--1350
18
2.2
17
86
13
51
45
8
18
27
1.77
1379--1484
50
2.1
50
100
0
212
33
5
23
37
1.78
1917--1963
20
2.2
22
85
7
62
23
25
23
27
2.00
2473--2532
31
2.0
30
83
3
75
40
16
18
25
1.91
4677--4732
21
2.7
20
88
8
76
23
30
21
25
1.99
4673--4732
22
2.8
22
82
12
79
23
30
21
25
1.99
5249--5340
31
3.0
31
87
6
132
36
18
18
26
1.94
5389--5463
38
1.9
38
84
12
100
36
17
10
36
1.84
6741--6792
21
2.5
20
81
9
61
32
7
23
36
1.83
7580--7645
23
2.8
23
88
2
96
28
22
18
30
1.97
10730--10812
24
3.5
24
94
0
148
19
31
12
37
1.88
12779--12829
3
17.3
3
88
11
79
29
0
0
70
0.87
23807--23878
31
2.4
30
81
4
83
26
31
9
31
1.89
23981--24128
35
4.3
35
87
1
163
43
19
0
36
1.56
32464--32519
29
2.0
28
82
10
69
60
1
0
37
1.07
32914--32969
21
2.5
24
85
8
73
17
3
26
51
1.62
36933--37015
6
13.8
6
75
5
51
15
46
3
33
1.63
38941--38971
14
2.2
14
94
0
53
61
6
0
32
1.21
38966--39015
19
2.7
19
75
12
50
52
6
0
42
1.26
39857--39890
6
5.5
6
86
6
50
50
5
0
44
1.26
42307--42387
13
6.2
13
74
16
60
60
3
1
34
1.22
48683--48747
13
5.4
12
75
21
57
29
3
35
32
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48665--48768
36
2.9
36
92
1
165
28
3
36
30
1.75
54362--54463
36
2.9
36
92
1
161
30
3
34
31
1.76
54381--54441
13
4.9
13
74
11
56
31
3
34
31
1.74
54395--54463
11
5.8
13
72
17
51
30
2
34
31
1.73
55929--55966
17
2.2
17
90
0
58
18
52
18
10
1.73
56141--56188
20
2.4
20
79
6
53
20
20
16
41
1.90
58356--58465
29
3.9
29
78
4
125
22
23
15
38
1.92
62509--62590
29
2.8
29
94
1
137
32
14
9
42
1.79

Tables:   1

The End!