Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006829.1 Hibiscus syriacus cultivar Beakdansim tig00017364_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52356

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
382--430
3
16.3
3
100
0
98
65
0
0
34
0.93
1277--1325
12
3.6
14
81
18
59
0
14
4
81
0.83
1290--1323
12
2.8
12
100
0
68
0
14
5
79
0.91
3260--3322
24
2.6
24
76
0
72
9
14
20
55
1.67
3552--3600
2
24.5
2
100
0
98
51
0
0
48
1.00
3725--3794
29
2.4
29
97
0
131
40
2
4
52
1.36
13488--13560
18
3.9
18
71
7
65
28
28
17
24
1.98
16558--16720
65
2.5
64
84
2
220
26
15
26
30
1.96
16562--16769
65
3.2
63
82
8
206
27
17
24
30
1.97
16671--16717
19
2.5
19
83
10
62
25
17
31
25
1.97
24132--24295
65
2.5
64
85
1
229
27
15
26
30
1.96
24246--24292
19
2.5
19
83
10
62
25
17
31
25
1.97
24136--24342
65
3.2
62
80
12
204
27
16
24
30
1.97
29033--29097
20
3.3
20
80
8
89
26
30
20
23
1.98
30789--31067
31
9.0
31
91
2
445
34
20
18
27
1.96
33618--33706
46
1.9
46
84
4
117
39
15
5
39
1.71
36827--36851
12
2.1
12
100
0
50
16
24
16
44
1.86
45362--45412
21
2.4
21
90
0
75
49
21
0
29
1.50
47099--47159
26
2.3
26
97
0
113
34
26
22
16
1.95
47417--47449
16
2.1
16
100
0
66
24
18
9
48
1.76
48358--48447
2
45.5
2
97
2
173
50
0
0
50
1.00

Tables:   1

The End!