Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006832.1 Hibiscus syriacus cultivar Beakdansim tig00017368_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57493

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3531--3600
24
2.9
24
93
0
122
48
15
5
30
1.68
3900--3957
29
2.1
28
83
6
73
41
6
12
39
1.69
5303--5351
19
2.7
17
87
9
62
32
0
6
61
1.21
5308--5348
19
2.2
19
100
0
82
36
0
4
58
1.20
8593--8623
16
1.9
16
93
0
53
29
0
6
64
1.18
11991--12077
35
2.5
34
80
12
97
54
10
8
27
1.62
14404--14442
18
2.2
18
95
4
71
64
2
0
33
1.08
42751--42830
29
2.7
29
82
1
97
28
6
18
46
1.73
43581--43659
24
3.3
24
75
1
79
24
16
18
40
1.91
50644--50682
17
2.3
17
86
8
53
51
0
0
48
1.00
52160--52206
5
9.6
5
77
13
53
74
2
4
19
1.09
52157--52206
14
3.6
14
86
7
66
76
2
4
18
1.04
52160--52258
11
9.3
11
68
19
50
71
6
5
17
1.24
52223--52270
23
2.1
22
81
11
53
72
6
8
12
1.26
55285--55334
19
2.6
19
81
12
66
74
2
4
20
1.08

Tables:   1

The End!