Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006833.1 Hibiscus syriacus cultivar Beakdansim tig00017369_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54024

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2510--2574
33
2.0
32
87
3
94
40
7
18
33
1.79
2547--3134
71
8.5
71
82
7
586
39
9
21
30
1.85
2514--3223
34
20.3
36
65
13
121
39
9
20
30
1.85
2825--3057
37
6.7
34
69
10
132
41
9
21
27
1.85
2528--3129
277
2.2
277
82
5
691
39
9
21
30
1.85
11856--11906
21
2.4
21
100
0
102
37
41
3
17
1.68
18103--18206
23
4.7
23
85
4
117
25
27
24
22
1.99
21438--21484
22
2.1
22
85
14
62
51
2
0
46
1.13
21444--21503
22
2.7
21
76
21
59
53
0
1
45
1.10
21679--21713
16
2.2
16
89
0
52
51
0
0
48
1.00
21422--22089
235
2.9
226
92
4
1087
42
6
7
43
1.58
21902--21939
16
2.4
16
86
8
51
44
0
2
52
1.14
34293--34363
21
3.3
21
79
9
81
25
32
26
15
1.95
34738--34781
23
1.9
23
85
0
61
54
2
2
40
1.25
34838--34872
2
17.5
2
100
0
70
48
0
0
51
1.00
38347--38731
81
4.7
82
78
4
321
30
23
15
30
1.95
39481--39517
2
18.5
2
100
0
74
51
0
0
48
1.00
48137--48332
102
1.9
102
88
2
295
39
15
15
29
1.88
49091--49136
17
2.8
16
87
9
65
54
21
15
8
1.68
50072--50105
15
2.3
15
89
0
50
44
0
0
55
0.99
51683--51723
14
3.0
14
80
13
50
58
0
0
41
0.98
51737--51809
29
2.4
29
82
8
85
56
1
1
41
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
53761--53791
16
1.9
16
100
0
62
38
0
16
45
1.47

Tables:   1

The End!