Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006837.1 Hibiscus syriacus cultivar Beakdansim tig00017376_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84328

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1614--1745
65
2.0
66
82
4
160
29
12
13
43
1.81
1818--2127
128
2.4
128
80
3
331
25
28
17
28
1.98
2208--2261
3
18.0
3
92
0
90
37
0
0
62
0.95
3790--3828
16
2.4
16
82
4
51
25
5
7
61
1.44
7981--8043
16
3.9
16
73
19
58
74
6
19
0
1.02
7975--8015
16
2.6
16
84
3
57
68
7
24
0
1.15
9095--9163
33
2.1
33
83
5
86
37
17
21
23
1.94
9471--9848
133
2.8
132
81
3
409
25
31
17
25
1.97
10122--10151
3
10.3
3
92
7
53
36
0
0
63
0.95
11561--11831
30
8.9
30
79
7
226
17
9
10
62
1.53
11608--11831
124
1.8
124
82
7
294
16
10
11
62
1.55
11909--11951
22
2.0
22
86
4
61
27
4
13
53
1.60
13658--13706
25
2.0
23
84
7
62
28
8
14
48
1.72
13904--13974
35
2.0
35
83
8
90
32
19
15
32
1.93
15483--15621
63
2.2
64
80
5
156
40
14
10
35
1.79
18843--18955
60
1.9
60
81
0
136
33
19
7
38
1.81
19123--19257
60
2.2
60
81
1
144
39
5
20
34
1.77
21364--21405
20
2.2
19
87
8
59
30
26
2
40
1.69
23275--23332
30
1.9
30
89
6
91
29
12
17
41
1.85
23697--23802
2
56.5
2
72
12
73
50
0
0
49
1.00
29781--29843
7
9.1
7
77
16
51
65
1
1
31
1.12
29761--29817
20
2.8
21
81
7
64
70
3
0
26
1.03
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29779--29817
21
1.9
21
89
5
62
69
0
0
30
0.89
31478--31933
106
4.3
106
89
0
644
22
19
25
32
1.97
43333--43395
7
9.1
7
77
16
51
65
1
1
31
1.12
43313--43369
20
2.8
21
81
7
64
70
3
0
26
1.03
43331--43369
21
1.9
21
89
5
62
69
0
0
30
0.89
44511--44563
27
2.0
26
85
14
72
56
0
0
43
0.99
51794--51845
24
2.2
24
82
0
59
11
15
25
48
1.78
51815--51845
14
2.2
14
94
0
53
9
12
22
54
1.67
51804--51865
24
2.6
24
89
5
90
12
12
19
54
1.70
52589--52663
10
7.7
10
69
21
61
9
12
21
57
1.62
52595--52659
16
4.1
16
95
0
121
7
12
23
56
1.61
52729--52761
16
2.1
16
100
0
66
6
12
24
57
1.57
64337--64366
14
2.2
13
94
5
51
73
0
0
26
0.84
64353--64399
22
2.3
22
78
10
55
57
8
0
34
1.29
70424--70502
29
2.7
29
90
0
122
30
20
10
39
1.85
70927--71259
111
3.0
111
95
0
585
36
7
11
44
1.68
76123--76161
19
2.1
19
95
0
69
20
38
15
25
1.92
76109--76271
65
2.5
65
86
3
222
30
26
15
28
1.96
78314--78351
14
2.7
14
95
0
67
60
0
15
23
1.35
83634--83788
64
2.5
60
83
9
197
29
26
15
28
1.96

Tables:   1

The End!