Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006838.1 Hibiscus syriacus cultivar Beakdansim tig00017385_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  88847

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9704--9746
20
2.2
20
82
0
50
37
20
11
30
1.89
12938--12972
17
2.1
17
89
10
54
8
2
34
54
1.46
25414--25438
2
12.5
2
100
0
50
48
0
0
52
1.00
27763--28607
422
2.0
424
98
0
1642
36
8
15
38
1.79
36842--36930
30
3.0
30
91
0
124
16
53
8
20
1.69
37487--37517
2
15.5
2
100
0
62
48
0
0
51
1.00
49974--50020
22
2.1
23
84
4
60
40
25
10
23
1.87
53407--53454
19
2.5
19
78
18
55
54
2
0
43
1.12
56872--56926
20
2.8
20
91
0
83
12
21
21
43
1.86
56911--56970
22
2.7
22
86
0
93
16
20
26
36
1.93
57725--57776
22
2.4
22
100
0
104
40
28
13
17
1.87
62636--62690
27
2.0
27
100
0
110
41
21
10
25
1.86
64515--64580
30
2.2
30
83
0
78
37
12
12
37
1.80
64891--64923
15
2.3
14
94
5
57
66
0
0
33
0.92
74706--74761
28
2.0
28
100
0
112
42
25
14
17
1.87
80224--80270
24
2.0
23
91
4
76
21
27
17
34
1.95
85503--85693
40
4.7
41
80
5
217
38
16
17
27
1.91
85503--85721
81
2.7
81
79
8
230
37
16
16
28
1.91

Tables:   1

The End!