Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006846.1 Hibiscus syriacus cultivar Beakdansim tig00017405_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66394

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
637--673
19
2.1
19
85
10
51
18
24
2
54
1.57
2190--2236
20
2.4
18
83
13
58
29
4
0
65
1.11
6929--6953
10
2.5
10
100
0
50
72
0
28
0
0.86
7421--7479
16
3.6
16
85
14
77
79
0
15
5
0.89
9105--9256
54
2.8
54
84
0
196
34
13
23
27
1.93
10756--10804
3
16.3
3
83
8
64
38
2
0
59
1.09
12174--12198
11
2.3
11
100
0
50
28
8
0
64
1.22
12900--13275
191
2.0
191
92
1
630
34
6
16
43
1.73
23501--23542
11
3.8
11
78
9
50
78
2
14
4
1.01
28849--28886
15
2.6
14
87
4
58
23
13
28
34
1.92
34458--34522
3
21.7
3
96
0
121
64
0
1
33
1.03
34839--35256
113
3.7
113
92
1
685
28
19
13
39
1.89
35952--36427
83
5.7
83
96
0
882
38
23
12
25
1.90
37565--37624
10
5.9
10
84
7
77
0
15
0
85
0.61
37564--37627
21
3.2
20
84
8
85
0
17
0
82
0.66
37567--37627
11
5.5
11
88
7
88
0
16
0
83
0.64
37565--37628
25
2.5
26
84
5
94
0
17
0
82
0.66
45933--45967
17
2.1
17
88
0
52
60
0
5
34
1.21
48124--48182
3
19.7
3
96
0
109
64
0
1
33
1.04
49934--49970
18
2.1
18
90
5
58
32
2
5
59
1.34
52352--52413
28
2.4
25
87
12
83
38
0
16
45
1.47
53927--53969
15
2.9
15
96
0
77
37
20
16
25
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60505--60549
17
2.6
17
89
3
63
62
8
15
13
1.54
62495--62561
23
2.9
23
78
8
73
17
23
23
34
1.96

Tables:   1

The End!