Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006851.1 Hibiscus syriacus cultivar Beakdansim tig00017431_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  113696

Tables:   1   

This is table  1  of  1  ( 69 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2788--2812
12
2.1
12
100
0
50
60
8
24
8
1.52
7011--7082
21
3.3
21
69
14
65
31
19
20
27
1.97
7012--7114
44
2.3
44
83
3
118
28
20
21
30
1.98
7597--7630
12
2.8
12
95
4
59
35
11
5
47
1.65
7597--7634
13
3.0
13
88
7
60
34
10
7
47
1.67
9324--9357
12
2.7
13
90
9
61
47
8
5
38
1.59
9701--9858
65
2.4
65
83
8
180
32
20
15
31
1.94
11483--11695
64
3.2
69
80
9
198
31
24
17
26
1.97
11667--11715
19
2.6
19
84
9
57
24
28
20
26
1.99
17469--17521
21
2.5
22
84
3
63
26
22
26
24
2.00
19016--19059
21
2.1
21
86
0
61
9
40
15
34
1.79
19390--19418
14
2.0
15
93
6
51
6
3
27
62
1.37
20075--20284
65
3.3
63
81
11
230
30
24
18
26
1.98
28720--28877
55
2.9
54
86
6
205
24
23
20
31
1.98
28871--29154
55
5.1
55
88
4
383
28
27
13
30
1.94
30169--30200
7
4.4
7
96
4
55
12
3
0
84
0.74
30165--30200
14
2.5
15
86
13
58
13
5
0
80
0.88
33710--33737
8
3.5
8
100
0
56
50
10
0
39
1.37
40155--40192
16
2.3
16
95
4
67
36
28
7
26
1.84
43728--43767
22
1.9
20
90
10
62
47
35
2
15
1.58
43760--43848
29
3.1
29
93
0
151
39
35
15
8
1.79
43761--43837
12
5.6
12
70
26
55
38
37
14
9
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43777--43827
17
3.3
17
74
25
58
35
35
19
9
1.85
50543--50591
24
2.1
23
85
7
64
55
0
2
42
1.11
53274--53350
37
2.1
37
85
4
102
48
1
3
46
1.28
53496--53533
20
1.9
20
88
0
58
21
26
10
42
1.85
64359--64450
8
12.0
8
78
21
76
39
0
1
59
1.04
64363--64436
2
41.5
2
72
22
67
40
0
1
58
1.07
64365--64449
11
7.6
10
81
15
64
38
0
1
60
1.05
67781--67838
31
1.9
31
86
6
84
17
18
8
55
1.67
69973--70018
18
2.6
17
82
3
56
34
4
30
30
1.77
70545--70618
38
2.0
38
94
2
132
36
36
10
16
1.83
73193--73224
14
2.3
14
100
0
64
87
0
6
6
0.67
73184--73224
8
5.4
8
80
11
50
87
0
4
7
0.65
73202--73351
5
28.6
5
76
15
85
75
0
20
4
1.01
73201--73333
6
22.0
6
73
14
60
75
0
19
3
0.99
73216--73288
11
6.8
11
87
9
107
73
0
26
0
0.83
73308--73345
19
2.0
19
85
10
51
71
0
23
5
1.07
73283--73350
27
2.5
26
77
11
66
76
1
14
7
1.07
75405--75864
91
5.0
90
87
4
625
39
15
20
24
1.92
75780--76128
117
3.0
117
84
4
449
35
15
22
25
1.94
77658--77719
25
2.5
24
77
12
63
22
3
1
72
1.08
83122--83163
16
2.8
16
85
7
61
35
16
14
33
1.89
80253--83127
4
722.2
4
95
1
5010
25
1
24
48
1.60
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
83201--83315
10
12.3
10
66
19
61
20
1
27
50
1.58
83203--83489
16
18.8
16
67
17
92
25
2
22
49
1.62
83247--83309
18
3.4
19
78
8
58
15
3
31
49
1.61
83246--83314
28
2.4
29
82
4
95
17
2
31
47
1.62
83263--83325
20
3.0
20
77
8
63
15
3
28
52
1.58
83369--83563
6
31.8
6
72
8
61
32
2
16
48
1.60
83370--83443
26
2.9
26
82
9
64
35
2
14
47
1.59
83381--83809
8
53.9
8
71
11
94
29
3
20
47
1.65
83321--83569
12
20.2
12
72
6
77
31
2
17
48
1.61
83523--83567
2
22.5
2
100
0
90
48
0
0
51
1.00
83585--84061
4
122.5
4
69
13
100
27
4
23
44
1.74
83769--83807
2
19.5
2
100
0
78
48
0
0
51
1.00
83821--84115
16
18.5
16
65
14
76
27
6
24
41
1.79
83905--84058
10
15.9
10
68
16
83
25
5
22
46
1.73
83906--84038
57
2.3
58
97
1
250
26
4
24
45
1.72
84778--84807
14
2.1
15
93
6
53
23
6
6
63
1.43
84534--85186
288
2.3
283
80
8
698
34
14
5
45
1.67
87188--87312
60
2.1
60
93
0
214
32
36
11
19
1.87
91548--91582
17
2.1
17
94
0
61
34
8
22
34
1.85
100820--100854
2
17.5
2
100
0
70
51
0
0
48
1.00
100898--100940
18
2.4
18
92
0
68
48
4
32
13
1.63
104852--104936
32
2.6
33
83
5
102
31
28
25
14
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108997--109112
32
3.7
32
80
1
117
31
28
23
17
1.97
110215--110260
18
2.6
18
96
0
83
30
15
4
50
1.63
111348--111422
32
2.3
33
81
4
82
30
28
22
18
1.97

Tables:   1

The End!