Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006852.1 Hibiscus syriacus cultivar Beakdansim tig00017432_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80401

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--957
4
243.5
4
96
3
1795
25
0
25
49
1.50
1642--1718
36
2.2
36
83
6
95
28
11
5
54
1.58
15557--15608
19
2.7
19
93
0
86
30
19
13
36
1.90
15578--15641
19
3.4
19
84
0
74
34
14
4
46
1.65
15896--15935
17
2.2
19
79
20
50
47
12
0
40
1.41
19928--20060
60
2.2
59
82
6
153
38
4
25
31
1.76
20018--20099
42
2.0
42
85
2
112
48
4
15
30
1.66
22333--22362
13
2.3
13
94
0
51
16
20
43
20
1.88
22388--22416
6
4.8
6
100
0
58
0
65
17
17
1.27
24799--24839
20
2.0
20
100
0
82
19
0
34
46
1.50
25289--25421
66
2.0
66
91
0
212
23
24
30
21
1.99
27038--27115
31
2.5
31
85
6
95
44
5
8
41
1.58
34177--34346
87
2.0
84
85
5
227
52
16
11
20
1.74
39567--39633
23
3.0
24
70
20
56
46
1
7
44
1.40
50625--51372
216
3.5
213
81
3
831
32
16
25
25
1.96
56297--56392
48
2.0
48
100
0
192
50
4
6
39
1.47
60318--60356
19
2.1
19
90
0
60
30
10
0
58
1.31
60382--60439
13
4.5
13
68
23
50
24
5
5
65
1.34
60380--60443
18
3.4
18
68
19
58
23
4
4
67
1.29
60381--60457
39
2.0
37
95
5
136
24
3
5
66
1.30
63165--63223
2
30.0
2
96
3
111
50
0
0
49
1.00
64641--64683
23
2.0
22
86
9
61
32
9
2
55
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64789--64824
2
18.0
2
100
0
72
50
0
0
50
1.00
72015--72052
18
2.1
18
95
0
67
26
10
23
39
1.87

Tables:   1

The End!