Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006857.1 Hibiscus syriacus cultivar Beakdansim tig00017448_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  95849

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16118--16188
32
2.3
30
78
9
79
36
12
0
50
1.41
16757--16848
29
3.1
29
73
11
87
39
3
22
34
1.71
17476--17545
23
3.0
23
85
0
95
31
24
28
15
1.96
20546--20584
19
2.0
18
85
14
51
41
5
0
53
1.23
23796--23829
12
2.8
12
100
0
68
23
8
32
35
1.86
25645--25686
18
2.3
18
100
0
84
38
0
16
45
1.48
29688--29729
22
1.9
22
90
9
68
11
33
33
21
1.90
30761--30821
24
2.6
23
70
19
63
16
26
26
31
1.96
38329--38375
17
2.6
19
86
6
62
25
4
0
70
1.05
40431--40621
95
2.0
95
98
0
373
31
15
17
35
1.91
50133--50192
31
1.9
31
93
0
102
41
5
8
45
1.56
50140--50215
31
2.5
31
82
4
91
46
9
3
40
1.54
50215--50711
22
22.6
22
89
1
746
48
10
0
40
1.42
50698--50724
12
2.2
12
100
0
54
55
0
0
44
0.99
57511--57551
19
2.2
19
100
0
82
53
19
0
26
1.45
61070--61342
137
2.0
137
89
4
417
28
15
16
39
1.89
61528--61558
16
2.0
16
93
6
55
6
12
51
29
1.65
61491--61584
49
1.9
49
89
4
145
12
8
39
39
1.74
62483--62535
21
2.5
21
93
0
88
30
30
20
18
1.97
62569--62829
82
3.2
82
94
1
450
21
18
23
36
1.95
62569--62829
42
6.3
42
93
2
440
21
18
23
36
1.95
63530--63802
42
6.5
42
89
2
397
36
22
18
21
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63679--63778
21
4.9
21
66
18
66
39
22
17
22
1.93
68841--68910
20
3.5
20
88
11
108
25
0
12
61
1.32
68847--68915
18
3.8
18
94
5
113
28
0
15
55
1.41
68847--68921
20
4.1
19
84
11
84
29
0
16
54
1.42
73250--73298
20
2.5
20
96
0
89
12
2
30
55
1.48
74226--74299
28
2.6
28
84
0
112
41
27
13
17
1.87
78554--78626
28
2.6
28
93
0
128
36
26
17
19
1.94
80926--81012
3
29.0
3
85
0
111
39
0
0
60
0.97
83120--83172
26
2.1
24
82
6
61
32
5
1
60
1.31
84526--84566
7
6.0
7
86
13
59
14
17
9
58
1.62
84526--84566
13
3.0
13
86
13
64
14
17
9
58
1.62
87889--87955
32
2.1
32
91
0
107
46
19
16
17
1.85
90233--90481
75
3.4
73
77
11
242
32
15
22
28
1.95
91804--91882
22
3.6
22
87
0
122
32
15
13
37
1.87
92546--92940
45
8.8
45
90
1
578
24
22
18
33
1.97
93183--93248
3
22.3
3
75
9
64
30
0
1
68
0.99
93352--93428
23
3.3
23
81
0
91
14
45
12
27
1.81

Tables:   1

The End!