Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006860.1 Hibiscus syriacus cultivar Beakdansim tig00017451_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70621

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16899--17080
60
3.0
59
79
6
186
34
20
2
42
1.66
16918--17080
62
2.7
60
76
7
159
34
22
3
39
1.70
18797--18822
13
2.0
13
100
0
52
38
15
23
23
1.92
21920--22008
3
30.7
3
92
6
148
34
1
0
64
1.01
21920--22011
26
3.5
27
89
7
145
34
2
0
63
1.07
43245--43334
8
11.0
8
77
14
69
80
0
17
2
0.82
43244--43332
12
6.9
13
77
18
89
79
0
17
2
0.83
43244--43323
20
3.9
20
81
16
85
80
0
17
2
0.83
43246--43327
9
8.3
10
71
23
59
80
0
17
2
0.82
43268--43347
4
21.2
4
75
21
75
76
0
21
2
0.91
45383--45473
42
2.2
41
86
2
119
23
19
21
35
1.96
45053--46086
233
4.4
231
84
5
1276
33
15
17
33
1.92
45053--46084
466
2.2
464
86
2
1426
33
15
17
33
1.92
46441--46795
134
2.6
134
85
0
478
31
25
14
29
1.94
46708--46886
94
1.9
95
86
3
254
29
25
16
28
1.97
50720--50766
5
9.4
5
78
17
53
19
2
2
76
0.99
52607--52647
5
8.2
5
80
20
50
39
0
0
60
0.96
52607--52649
21
2.1
21
95
4
79
39
0
0
60
0.97
61274--61692
37
11.6
37
82
7
424
38
18
17
25
1.93
61564--61659
30
3.0
30
85
10
120
38
18
18
23
1.93
61564--61692
66
2.0
66
92
0
213
36
18
20
24
1.95
61870--61916
5
9.2
5
82
13
60
40
0
0
59
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61870--61918
3
16.7
3
76
19
50
40
0
0
59
0.98
61870--61924
21
2.8
21
91
8
89
41
0
0
58
0.98
67786--67812
14
1.9
14
100
0
54
66
0
0
33
0.92
68409--68614
97
2.1
99
96
1
380
39
10
7
41
1.69

Tables:   1

The End!