Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006861.1 Hibiscus syriacus cultivar Beakdansim tig00017452_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  89695

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2364--2404
12
3.5
12
78
15
50
14
7
2
75
1.12
3812--3854
18
2.4
18
80
7
52
20
6
25
46
1.76
4290--4334
17
2.6
17
89
3
63
62
8
15
13
1.54
6250--6316
23
2.9
23
78
8
73
19
23
23
32
1.97
12093--12144
21
2.5
19
77
22
52
21
19
21
38
1.94
13947--14001
26
2.2
25
83
3
65
30
5
23
40
1.77
15571--15631
28
2.1
29
96
3
115
42
22
11
22
1.86
16433--16479
23
2.0
23
95
0
85
25
23
10
40
1.87
20124--20188
13
4.8
13
78
17
53
73
0
9
16
1.07
20139--20180
9
4.7
9
78
21
52
78
0
4
16
0.91
20241--20265
2
12.5
2
100
0
50
52
0
0
48
1.00
20254--20333
40
2.0
40
83
9
103
57
6
5
31
1.45
20496--20546
25
2.0
27
84
7
70
74
5
1
17
1.11
20546--20576
2
15.5
2
100
0
62
51
0
0
48
1.00
20654--20728
31
2.4
32
78
17
77
56
4
4
36
1.37
20757--20827
18
3.9
19
71
23
55
61
1
2
33
1.19
21249--21320
35
2.1
35
97
0
135
27
19
11
41
1.85
21804--22537
106
7.0
105
87
4
979
23
20
23
33
1.97
21948--22537
305
1.9
306
94
0
1029
22
19
23
34
1.97
23520--23576
23
2.5
22
83
11
69
7
14
3
75
1.14
30611--30655
23
2.0
23
90
0
72
24
26
26
22
2.00
30623--30937
149
2.1
149
95
1
569
34
21
16
27
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32398--32442
21
2.1
21
87
0
63
15
24
28
31
1.96
34034--34058
9
2.8
9
100
0
50
80
0
0
20
0.72
34117--34157
2
20.5
2
100
0
82
51
0
0
48
1.00
34626--34656
2
15.5
2
100
0
62
51
0
0
48
1.00
34657--34706
16
3.2
16
72
13
50
70
0
2
28
0.99
34636--34767
66
2.1
63
83
11
162
62
1
3
33
1.20
35141--35212
35
2.1
35
100
0
144
27
20
11
40
1.87
36823--36867
24
2.0
22
82
8
54
71
2
0
26
0.98
50267--50324
24
2.4
24
91
0
89
43
36
3
17
1.66
54845--54896
19
2.7
19
93
0
86
26
19
30
23
1.98
54863--55091
65
3.6
63
78
15
211
27
17
24
31
1.97
56174--56216
22
2.0
22
100
0
86
34
18
37
9
1.83
57773--57853
23
3.6
22
78
8
83
24
24
24
25
2.00
57776--57869
44
2.1
44
82
7
111
25
21
24
28
1.99
63554--63602
21
2.3
21
89
0
80
26
24
24
24
2.00
63640--63819
65
2.8
63
82
9
213
30
17
22
29
1.97
63660--63867
65
3.2
65
81
12
223
27
17
23
31
1.97
73516--74003
46
10.6
46
92
1
771
20
24
13
40
1.89

Tables:   1

The End!