Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006862.1 Hibiscus syriacus cultivar Beakdansim tig00017454_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80977

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
594--1796
317
3.8
318
83
7
1414
37
18
15
29
1.91
4874--4911
6
6.0
6
90
9
58
63
0
0
36
0.95
4874--4911
12
3.0
13
92
7
69
63
0
0
36
0.95
6404--6433
11
2.7
11
94
0
51
73
3
0
23
0.98
6483--6802
36
8.9
37
76
13
140
45
5
1
46
1.36
6585--6811
36
6.2
36
81
9
264
45
3
1
48
1.29
6544--6811
73
3.6
73
90
3
396
45
4
1
48
1.33
8621--8660
20
2.0
20
100
0
80
40
10
10
40
1.72
15126--15183
3
20.0
3
75
7
57
37
1
0
60
1.07
19180--19275
29
3.2
29
69
11
77
36
18
2
42
1.62
19857--19893
20
1.9
19
89
10
58
45
10
24
18
1.81
20035--20111
37
2.3
31
72
21
73
49
2
0
48
1.15
24194--24257
26
2.4
26
78
5
65
37
7
3
51
1.47
25042--25076
18
2.1
18
89
10
56
25
0
0
74
0.82
28932--28976
23
2.0
23
100
0
90
46
4
22
26
1.70
32233--32279
24
2.0
24
100
0
94
44
0
4
51
1.21
32307--32346
7
5.6
7
82
5
53
45
5
0
50
1.23
33170--33680
255
2.0
255
100
0
1022
34
17
18
29
1.93
53124--53400
140
2.0
135
95
3
500
35
18
5
40
1.74
55149--55185
18
2.0
19
89
5
58
27
8
40
24
1.83
60197--60244
24
2.0
24
91
0
78
31
2
31
35
1.70
61403--61436
16
2.1
16
88
0
50
50
0
2
47
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61478--61512
17
1.9
19
88
11
56
25
2
5
65
1.28
61942--62189
130
1.9
130
91
0
406
35
13
15
35
1.87
62586--62661
35
2.2
35
90
0
116
35
1
22
40
1.62
64052--64094
23
2.0
22
86
9
61
30
0
4
65
1.13
64112--64144
15
2.1
16
88
5
50
45
0
0
54
0.99
64112--64144
8
4.2
8
88
7
50
45
0
0
54
0.99
69111--69141
2
15.5
2
100
0
62
48
0
0
51
1.00
73610--73640
2
15.5
2
100
0
62
51
0
0
48
1.00
76319--76357
20
2.0
20
89
0
60
25
25
7
41
1.82

Tables:   1

The End!