Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006864.1 Hibiscus syriacus cultivar Beakdansim tig00017461_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70410

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4941--4991
18
2.8
18
96
0
93
21
47
11
19
1.81
16209--16428
56
3.9
56
85
4
291
30
19
13
35
1.91
16209--16428
111
2.0
113
85
3
302
30
19
13
35
1.91
18952--18978
14
1.9
14
100
0
54
55
0
37
7
1.28
19156--19190
17
1.9
19
88
11
56
31
8
34
25
1.86
22514--22538
2
12.5
2
100
0
50
48
0
0
52
1.00
23551--24442
113
7.9
113
90
2
1289
28
18
15
38
1.91
24127--24182
20
2.8
20
69
28
55
17
19
10
51
1.74
33738--33775
15
2.8
13
88
11
51
68
2
5
23
1.23
49874--49902
15
1.9
15
100
0
58
24
27
34
13
1.93
50234--50283
24
2.0
24
84
3
64
54
0
2
44
1.11
52918--52973
17
3.5
16
76
13
53
64
0
1
33
1.04
56904--57023
35
3.3
36
88
6
172
43
19
5
32
1.72
56952--57015
20
3.4
20
66
29
59
45
18
4
31
1.70
58059--58108
21
2.4
21
93
0
82
22
28
26
24
1.99
61546--61665
35
3.3
36
88
6
172
43
19
5
32
1.72
61594--61657
20
3.4
20
66
29
59
45
18
4
31
1.70
62701--62750
21
2.4
21
93
0
82
22
28
26
24
1.99
66183--66301
37
3.3
36
86
9
163
42
19
5
32
1.73
67334--67383
21
2.4
21
93
0
82
22
28
26
24
1.99

Tables:   1

The End!